Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h17f
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CA446 Cluster: cation diffusion facilitator fam...    33   5.5  
UniRef50_UPI0000EBE740 Cluster: PREDICTED: hypothetical protein;...    33   7.2  
UniRef50_Q8ILV0 Cluster: Putative uncharacterized protein; n=9; ...    33   7.2  
UniRef50_Q89UX4 Cluster: Bll1285 protein; n=1; Bradyrhizobium ja...    32   9.5  
UniRef50_P28155 Cluster: Hydrogenase nickel incorporation protei...    32   9.5  

>UniRef50_UPI00006CA446 Cluster: cation diffusion facilitator family
           transporter containing protein; n=1; Tetrahymena
           thermophila SB210|Rep: cation diffusion facilitator
           family transporter containing protein - Tetrahymena
           thermophila SB210
          Length = 549

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -2

Query: 518 YRHYYQHD*NIDYNKVHTFHHGNCYMDDEKHHTSMDYDLEVN--QSLFAVEAP*HYCQTS 345
           + H + HD N D+N  H  +H   +  D  H  +  +D + +  +++  VEA  +Y   +
Sbjct: 332 HNHDHNHDHNHDHNHDHDHNHNQDHNHDHDHDNNHKHDSQQDKKKNISQVEAKDNYNLRA 391

Query: 344 LTAKQINQLLQGI 306
                +  LLQ I
Sbjct: 392 AMIHVLGDLLQSI 404


>UniRef50_UPI0000EBE740 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 458

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 530 DDGGYRHYYQHD*NIDYNKVHTFHH--GNCYMDDEKHH 423
           DD  Y  YY H+ + D+N    ++H   N Y DD+ HH
Sbjct: 388 DDYDYNDYYDHN-DDDHNNNDNYYHDDDNYYHDDDHHH 424


>UniRef50_Q8ILV0 Cluster: Putative uncharacterized protein; n=9;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2770

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 518  YRHYYQHD*NIDYNKVHTFHHGNCYMDDEKHHTSMDYDLEVNQS 387
            + H++ H  N  +N  H  HH + +     HH    +D  +N+S
Sbjct: 1219 HNHHHNHHHNHHHNHHHNHHHNHHHNHHHNHHHHHHHDNNINKS 1262


>UniRef50_Q89UX4 Cluster: Bll1285 protein; n=1; Bradyrhizobium
           japonicum|Rep: Bll1285 protein - Bradyrhizobium
           japonicum
          Length = 118

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 389 TGLPPNHNPWMYGVFHHPYNNYHGGMYAPYYNQY 490
           T +   H    +G  HH + ++H G Y P+Y  Y
Sbjct: 51  TDISAQHRHHHHGYRHHQWRHHHHGYYRPHYRSY 84


>UniRef50_P28155 Cluster: Hydrogenase nickel incorporation protein
           hypB; n=6; Proteobacteria|Rep: Hydrogenase nickel
           incorporation protein hypB - Rhizobium leguminosarum bv.
           viciae
          Length = 299

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -2

Query: 542 TRCIDDGGYRHYYQHD*NIDYNKVHTFHHGNCYMDDEKHHTSMDYDLEVNQSLFAVEAP 366
           T  + D G+ H++ HD + D++  H  H G+   DD  HH + D  +  ++ +  V  P
Sbjct: 16  THEVGDDGHGHHH-HDGHHDHDHDHDHHRGDHEHDD--HHHAEDGSVHYSKGIAGVHVP 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,953,889
Number of Sequences: 1657284
Number of extensions: 12233471
Number of successful extensions: 29021
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28930
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)