Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h17f
         (618 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0216 - 15942379-15942852,15942956-15943033                       30   1.7  
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145...    29   2.2  
02_05_0591 - 30183105-30183869                                         28   5.2  

>10_08_0216 - 15942379-15942852,15942956-15943033
          Length = 183

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 425 GVFHHPYNNYHGGMYAPYYNQY 490
           G ++ PY  Y+G  Y PYY  Y
Sbjct: 48  GGYYGPYGPYYGPYYGPYYGPY 69


>07_01_1143 -
           10711023-10711884,10713603-10713826,10714253-10714522,
           10715071-10715175
          Length = 486

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = +2

Query: 338 LLRMSGNNAKEPPLQTMTGLPPNHNPWMYGVFHHPYNNYHGGMYAPYYNQY 490
           L+     + K  P Q   G   + +   Y     PY  YHGG Y PYY  Y
Sbjct: 379 LVESQEGDGKPGPQQAGQGQASSSSGQSYPEPPPPY--YHGGQYPPYYPPY 427


>02_05_0591 - 30183105-30183869
          Length = 254

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 398 PPNHNPWMYGVFHHPYNNYHGGMYAPYYNQY 490
           PP H P  +  FH     +H G YAP Y+ Y
Sbjct: 177 PPPHPPPHHHAFHQLMPPHH-GQYAPPYDMY 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,553,278
Number of Sequences: 37544
Number of extensions: 341222
Number of successful extensions: 724
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)