Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h14r
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5ZD47 Cluster: Putative uncharacterized protein P0445D...    34   4.3  
UniRef50_Q559G0 Cluster: Putative uncharacterized protein; n=4; ...    33   10.0 

>UniRef50_Q5ZD47 Cluster: Putative uncharacterized protein
           P0445D12.8; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0445D12.8 - Oryza sativa subsp. japonica (Rice)
          Length = 317

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 245 LEFHKNISVPCVLFLVCFCRFGYFV*RMIFSVLLFDKCEGTKSVLV*WFSQIRIRTF 75
           L    +  +P ++  V FC   + V  +I  V++ D C   KS  V WF   R RT+
Sbjct: 90  LSLSLHFKIPLLISFVSFCFSSHVVECLIAFVVILDFCVWIKSSFVVWFCSARRRTW 146


>UniRef50_Q559G0 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 1212

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +2

Query: 131 HIYQTIIPKKSCVKQSNQIYKNKLKTIHKEQKYFYGILKNKILCD*IDGGM 283
           +I Q +  +K   K ++ IY+  +K I K ++ F+ + KNKIL   I G +
Sbjct: 70  NIKQELTKEKLINKFNSSIYQLPIKDIEKHEQLFWRVFKNKILFKTIFGNL 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,446,267
Number of Sequences: 1657284
Number of extensions: 11324054
Number of successful extensions: 23373
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23372
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)