Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h14r
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   6.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 488 N*NLCAECEIYFTNSVAVTLLVIGNALKETFRGVKK 595
           N N   +C  YF   V + LL++G  LK  F  + K
Sbjct: 48  NYNFTKKC--YFLRMVLIDLLIVGCILKHIFNILMK 81


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 473 SKLDVHQRYLVIKNNILATLFWHRQYCRYSELSCL 369
           SKLDV Q  L+  N++      H+Q   + ELS +
Sbjct: 296 SKLDVEQMNLLHSNDLNMHQQHHQQNMSHEELSAM 330


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 287 GTFHHLSSHIRFCFL 243
           G  HHL+ H   CFL
Sbjct: 364 GWIHHLARHAVACFL 378


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 386 YTYNIAYAKTMWLIYCFLSQGNVGV 460
           Y +       +W+++  +  GNVGV
Sbjct: 21  YFFETEQFTLLWVLFVIIVAGNVGV 45


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 288 LVFLLCIK*SYCCYCVSID*CVLNF*R 368
           L+FLLCI   YC   + +  C+  F R
Sbjct: 279 LLFLLCIYYFYCALIILL--CIYYFCR 303



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 288 LVFLLCIK*SYCCYCV 335
           L FLLCI   YC + +
Sbjct: 140 LFFLLCIYYFYCAFII 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,055
Number of Sequences: 336
Number of extensions: 3428
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)