Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h14f
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    24   0.89 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   0.89 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   0.89 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    24   1.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.3  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   FARSSSP*IDACTWRPL 53
           FAR+ SP +D   W+P+
Sbjct: 459 FARNGSPNVDGPDWKPI 475


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   FARSSSP*IDACTWRPL 53
           FAR+ SP +D   W+P+
Sbjct: 459 FARNGSPNVDGPDWKPI 475


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   FARSSSP*IDACTWRPL 53
           FAR+ SP +D   W+P+
Sbjct: 461 FARNGSPNVDGPDWKPI 477


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   FARSSSP*IDACTWRPL 53
           FAR+ SP +D   W+P+
Sbjct: 461 FARNGSPNVDEPDWKPI 477


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201  AAIFAILAIA-PCVYRYRKQLYIIFVTLPRDLKFLWRYANGMVRSKRWGRQDATV 362
            AA F I A+  P  +   K   I +VT+P     L  Y+   + +  WG ++ TV
Sbjct: 985  AAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTV 1039


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201  AAIFAILAIA-PCVYRYRKQLYIIFVTLPRDLKFLWRYANGMVRSKRWGRQDATV 362
            AA F I A+  P  +   K   I +VT+P     L  Y+   + +  WG ++ TV
Sbjct: 985  AAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVSWGTREVTV 1039


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 44  SPNTQTHPSASCKYADSTSSTGVAS 68


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 SSNAVTWSAYSCPTAASTSGRGLAS 573
           S N  T  + SC  A STS  G+AS
Sbjct: 88  SPNTQTHPSASCKYADSTSSTGVAS 112


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 392 ESRCAMFYCCW 424
           ES+C +F+ CW
Sbjct: 105 ESKCDVFWNCW 115


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 392 ESRCAMFYCCW 424
           ES+C +F+ CW
Sbjct: 105 ESKCDVFWNCW 115


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 RKRTQHGGHRGGNCHQSHERCQQ 129
           ++   +GG +G N HQ     QQ
Sbjct: 185 QQHMMYGGQQGANMHQQGPPHQQ 207


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 RKRTQHGGHRGGNCHQSHERCQQ 129
           ++   +GG +G N HQ     QQ
Sbjct: 187 QQHMMYGGQQGANMHQQGPPHQQ 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,491
Number of Sequences: 336
Number of extensions: 2673
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)