Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h14f
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    26   0.85 
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   2.6  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   7.9  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   7.9  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +2

Query: 311 REWHGKVEAMGTS-RCNCSGIVHATC*TESRCA 406
           R+ H  V       RC  SG + ATC  E RCA
Sbjct: 417 RDCHSPVNHSNVCIRCGTSGHLAATCEAEVRCA 449


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -3

Query: 463 DFDAICPKVHVRSPTTIKHGASGFRLARRVNNSATVAS*RPHRFDLTM 320
           D D    K H R+ TT+K    G ++   V N   +   +P    LT+
Sbjct: 85  DLDLDSGKSHFRAVTTLKRRYPGLKVFLSVGNYRDLGEEKPFEKYLTL 132


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 RELCKSTCSSNAVTWSAYSCPTAASTSGRGL 567
           R++ K  C S AV+  A      AS +G+G+
Sbjct: 367 RDMIKKICDSFAVSPIAREVLETASVAGKGM 397


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 RELCKSTCSSNAVTWSAYSCPTAASTSGRGL 567
           R++ K  C S AV+  A      AS +G+G+
Sbjct: 367 RDMIKKICDSFAVSPIAREVLETASVAGKGM 397


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 RELCKSTCSSNAVTWSAYSCPTAASTSGRGL 567
           R++ K  C S AV+  A      AS +G+G+
Sbjct: 345 RDMIKKICDSFAVSPIAREVLETASVAGKGM 375


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 200 SCNIRYPRDSALCVSLQKAALHYFRHSSTRPQIP 301
           +C+ RY RD+  C         Y R S   P IP
Sbjct: 156 ACDSRYERDTYNCTEGCFCKPSYIRSSDGGPCIP 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,852
Number of Sequences: 2352
Number of extensions: 13100
Number of successful extensions: 77
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)