Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h14f
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 7.3
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 88 RALLGYSPATAWTRCW 135
R ++GY P W CW
Sbjct: 480 RDMIGYYPCCWWKICW 495
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 88 RALLGYSPATAWTRCW 135
R ++GY P W CW
Sbjct: 533 RDMIGYYPCCWWKICW 548
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 568 PSHVQMYSPLLGRNTQTTSPRLSCRCSCIVR 476
P ++ P+L +T TTSP S + S IVR
Sbjct: 313 PMLQKLEKPVLSSSTTTTSPMTSTK-STIVR 342
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 70 RTERERSKEPKIISNNN 86
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 303 RTERERSKEPKIISNNN 319
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 464 RFRRNLSKGPRSISNNN 414
R R SK P+ ISNNN
Sbjct: 303 RTERERSKEPKIISNNN 319
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 294 KFLWRYANGMVRSK 335
KFLW Y GM S+
Sbjct: 80 KFLWWYKQGMFLSR 93
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 294 KFLWRYANGMVRSK 335
KFLW Y GM S+
Sbjct: 80 KFLWWYKQGMFLSR 93
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 258 LYIIFVTLPRDLKF 299
LY++F TLP L F
Sbjct: 140 LYLLFATLPLRLSF 153
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,381
Number of Sequences: 438
Number of extensions: 3388
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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