Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h13r
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    32   0.017
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   1.9  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   3.4  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   3.4  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    24   3.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.9  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 31.9 bits (69), Expect = 0.017
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -3

Query: 346 ISAQSSGSLKKVDNIDVLAIQGQYEYSAPDGTPVKFTYTAD-ENGYQPQSELLPVAPPMP 170
           + A +  S  + ++ D   +QG Y    PDGT     YTAD  NG+       P+A    
Sbjct: 30  LGALTGDSKSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRREPLAAKTI 89

Query: 169 EAIRRAIDYILAHP 128
            A       ++A P
Sbjct: 90  VAAAPVATKVIAQP 103


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -3

Query: 283 GQYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMP 170
           G Y+  + DG P+       + G++PQ+       P+P
Sbjct: 28  GMYDNISNDGIPMDALAELQDTGFEPQTRARSNTWPLP 65


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 177 GGATGSNSLCGWYPFSSA 230
           GGA G+ SLC  YP   A
Sbjct: 122 GGAAGATSLCFVYPLDFA 139


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 177 GGATGSNSLCGWYPFSSA 230
           GGA G+ SLC  YP   A
Sbjct: 122 GGAAGATSLCFVYPLDFA 139


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 177 GGATGSNSLCGWYPFSSA 230
           GGA G+ SLC  YP   A
Sbjct: 122 GGAAGATSLCFVYPLDFA 139


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/59 (22%), Positives = 25/59 (42%)
 Frame = +1

Query: 157  DGWLQALEEQLEVTHSVVGIRSRQLYT*TSQGFRQAQSIHIDLGWREHRYYQLSSRIQM 333
            +G+ +AL+        +VG+ +    T   +     QS  ID      ++Y   SR ++
Sbjct: 2422 EGFRKALQIYNSHVPDIVGVLNNHFMTALGRSAGDVQSYEIDANGNHRKFYTGFSRYRL 2480


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,398
Number of Sequences: 2352
Number of extensions: 9620
Number of successful extensions: 50
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)