Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h12r
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 266 1e-71
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 266 1e-71
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 204 7e-53
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 36 0.030
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 29 3.5
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 29 3.5
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 8.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 8.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 8.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical protein
ZK836.2 protein.
Length = 911
Score = 266 bits (651), Expect = 1e-71
Identities = 135/239 (56%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Frame = -1
Query: 718 IASGESKWVRSNGLVMLLPHGYDGAASEHSSCRLERFLQLTDSPESAP--DSEAACLHVA 545
+AS ESKW+ S+GL MLLPHG+DGA EHSSCR+ERFLQL DS E D E + VA
Sbjct: 670 LASAESKWLTSSGLTMLLPHGFDGAGPEHSSCRMERFLQLCDSREDQTPVDGENVNMRVA 729
Query: 544 NPTTPAQYFHLLRRQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVIGDGLA 365
NPTT AQYFHLLRRQVV NYRKPLI+V PK+LLR A S +++F P T +Q VI + A
Sbjct: 730 NPTTSAQYFHLLRRQVVPNYRKPLIVVGPKILLRHPKAASTINEFGPGTTYQNVISEEHA 789
Query: 364 -DALKVKRVIFVSGKHYYELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNAT 191
+ K+K+VIFVSGKH+ + K R L+D VAIVRVE L PFP+ +LQ L KY A
Sbjct: 790 TSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFPVVDLQAVLKKYPGAQ 849
Query: 190 KFIWSQEEHRNMGAWSFMKPRFENLCGRKLVYAGRSEAPTPAVGASSLHRVEVEHVLKE 14
F+WSQEE RN GAWSF++PRFEN G +L +AGR E A H E E V+ +
Sbjct: 850 DFVWSQEEPRNAGAWSFVRPRFENALGVRLKFAGRPELAWTATAIGEHHTKEAEEVINQ 908
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 266 bits (651), Expect = 1e-71
Identities = 135/239 (56%), Positives = 163/239 (68%), Gaps = 4/239 (1%)
Frame = -1
Query: 718 IASGESKWVRSNGLVMLLPHGYDGAASEHSSCRLERFLQLTDSPESAP--DSEAACLHVA 545
+AS ESKW+ S+GL MLLPHG+DGA EHSSCR+ERFLQL DS E D E + VA
Sbjct: 670 LASAESKWLTSSGLTMLLPHGFDGAGPEHSSCRMERFLQLCDSREDQTPVDGENVNMRVA 729
Query: 544 NPTTPAQYFHLLRRQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRTHFQPVIGDGLA 365
NPTT AQYFHLLRRQVV NYRKPLI+V PK+LLR A S +++F P T +Q VI + A
Sbjct: 730 NPTTSAQYFHLLRRQVVPNYRKPLIVVGPKILLRHPKAASTINEFGPGTTYQNVISEEHA 789
Query: 364 -DALKVKRVIFVSGKHYYELHKERVRARLED-VAIVRVEALAPFPLPELQMQLSKYKNAT 191
+ K+K+VIFVSGKH+ + K R L+D VAIVRVE L PFP+ +LQ L KY A
Sbjct: 790 TSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFPVVDLQAVLKKYPGAQ 849
Query: 190 KFIWSQEEHRNMGAWSFMKPRFENLCGRKLVYAGRSEAPTPAVGASSLHRVEVEHVLKE 14
F+WSQEE RN GAWSF++PRFEN G +L +AGR E A H E E V+ +
Sbjct: 850 DFVWSQEEPRNAGAWSFVRPRFENALGVRLKFAGRPELAWTATAIGEHHTKEAEEVINQ 908
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 204 bits (497), Expect = 7e-53
Identities = 116/255 (45%), Positives = 156/255 (61%), Gaps = 20/255 (7%)
Frame = -1
Query: 718 IASGESKWVRSNGLVMLLPHGYDGAASEHSSCRLERFLQLTDSPESAP--------DSEA 563
I+SG+SKW+R +GLVMLLPHGY+G EHSS R ERFLQ+ + + EA
Sbjct: 762 ISSGQSKWIRQSGLVMLLPHGYEGMGPEHSSARPERFLQMCNEDDEIDLEKIAFEGTFEA 821
Query: 562 ACLH-----VANPTTPAQYFHLLRRQVVRNYRKPLIIVAPKLLLRLADAVSPLSDFAPRT 398
LH VAN TTPA +HLLRRQV +RKP ++ +PK LLR A SP+ DF +
Sbjct: 822 QQLHDTNWIVANCTTPANIYHLLRRQVTMPFRKPAVVFSPKSLLRHPMARSPVEDFQSGS 881
Query: 397 HFQPVIGDGLADALK---VKRVIFVSGKHYYELHKERVRARLE-DVAIVRVEALAPFPLP 230
+FQ VI + A + VKRV+F +GK YY++ R E DVA+VRVE L+PFP
Sbjct: 882 NFQRVIPETGAPSQNPPDVKRVVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYD 941
Query: 229 ELQMQLSKYKNATKFIWSQEEHRNMGAWSFMKPRFENLC---GRKLVYAGRSEAPTPAVG 59
+Q + KY+ A + +W+QEEH+NMGAWSF++PR +L GR YAGR + +PA G
Sbjct: 942 LVQQECRKYQGA-EILWAQEEHKNMGAWSFVQPRINSLLSIDGRATKYAGRLPSSSPATG 1000
Query: 58 ASSLHRVEVEHVLKE 14
H E + ++ +
Sbjct: 1001 NKFTHMQEQKEMMSK 1015
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = -1
Query: 250 LAPFPLPELQMQLSKYKNATKFIWSQEEHRNMGAWS 143
L+ PLP L+ +++Y ++ KF+ S+EEH N+ A S
Sbjct: 128 LSNLPLPRLEDTVTRYTDSMKFVISEEEHNNLIATS 163
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/101 (27%), Positives = 44/101 (43%)
Frame = -1
Query: 382 IGDGLADALKVKRVIFVSGKHYYELHKERVRARLEDVAIVRVEALAPFPLPELQMQLSKY 203
+ D L +V V+GK E R ++ED + VEA A + + + +L+ +
Sbjct: 674 VNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEA-AIVRIMKARKKLN-H 731
Query: 202 KNATKFIWSQEEHRNMGAWSFMKPRFENLCGRKLVYAGRSE 80
N + Q HR M + +K R E L R+ Y R E
Sbjct: 732 NNLVAEVTQQLRHRFMPSPIIIKQRIETLIERE--YLARDE 770
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 29.1 bits (62), Expect = 3.5
Identities = 28/101 (27%), Positives = 44/101 (43%)
Frame = -1
Query: 382 IGDGLADALKVKRVIFVSGKHYYELHKERVRARLEDVAIVRVEALAPFPLPELQMQLSKY 203
+ D L +V V+GK E R ++ED + VEA A + + + +L+ +
Sbjct: 671 VNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEA-AIVRIMKARKKLN-H 728
Query: 202 KNATKFIWSQEEHRNMGAWSFMKPRFENLCGRKLVYAGRSE 80
N + Q HR M + +K R E L R+ Y R E
Sbjct: 729 NNLVAEVTQQLRHRFMPSPIIIKQRIETLIERE--YLARDE 767
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 644 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 675
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 935 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 966
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 950 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 981
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 950 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 981
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 644 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 675
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 935 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 966
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 950 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 981
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 269 HCEGGSTRTLPPPGATDATQQIQKRHEVYLES 174
HCE +++T PP +++Q RH+ +S
Sbjct: 950 HCEPSNSKTSQPPTPKSRPEKVQIRHDTISKS 981
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 547 ANPTTPAQYFHLLRRQVVRNYRKPLI 470
ANP +P F +L ++VRN + PLI
Sbjct: 149 ANPPSPVIKFDVLTSRLVRNLKMPLI 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,039,663
Number of Sequences: 27780
Number of extensions: 350860
Number of successful extensions: 1171
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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