Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h12f
(628 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.8
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K LHY+
Sbjct: 320 NNYNYNNYNNNYKPLHYN 337
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 183 YYNNFYELHQNSTYV 139
Y NN+ LH N Y+
Sbjct: 327 YNNNYKPLHYNINYI 341
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 523 LLYGYSGNNSIKSLVDELVKIY 588
L+ G SGN K L D+L+ Y
Sbjct: 15 LISGCSGNPDAKRLYDDLLSNY 36
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 5.6
Identities = 17/79 (21%), Positives = 30/79 (37%)
Frame = +1
Query: 280 HSGAGVFGHRPTIADEYEIPEDIISKRYKNCRAQQLVNAYRTYGHLKATIDNVDYRNESR 459
H+G G +GH P E ++P + + R H I N D
Sbjct: 275 HTGLGHYGHHPD-PGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCD------ 327
Query: 460 NIKELHYSRYGLDPEETVD 516
++K + + +D +T+D
Sbjct: 328 SVKIKFETLHTMDSSDTID 346
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 433 NVDYRNESRNIKELHYSRYGLDPEET 510
N +YR ++R ++LH + L E T
Sbjct: 9 NREYREKNRRYEKLHNEKEKLLEERT 34
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 87 NNYNYNNYNNNYKPLYYN 104
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 87 NNYNYNNYNNNYKPLYYN 104
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 87 NNYNYNNYNNNYKPLYYN 104
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 87 NNYNYNNYNNNYKPLYYN 104
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 320 NNYNYNNYNNNYKPLYYN 337
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 320 NNYNYNNYNNNYKPLYYN 337
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 320 NNYNYNNYNNNYKPLYYN 337
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 320 NNYNYNNYNNNYKPLYYN 337
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 430 DNVDYRNESRNIKELHYS 483
+N +Y N + N K L+Y+
Sbjct: 309 NNYNYNNYNNNYKPLYYN 326
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,734
Number of Sequences: 438
Number of extensions: 3761
Number of successful extensions: 50
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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