Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h11r
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29053| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22) 34 0.11
SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027) 29 4.1
SB_11988| Best HMM Match : Ank (HMM E-Value=5.1e-32) 29 4.1
SB_50673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 29 5.4
SB_37194| Best HMM Match : Pigment_DH (HMM E-Value=4.9) 28 7.1
SB_13538| Best HMM Match : Pigment_DH (HMM E-Value=4.9) 28 7.1
SB_33647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_29053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 56.8 bits (131), Expect = 2e-08
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 11/222 (4%)
Frame = -2
Query: 636 IEYVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLDVGLSLQRLQMVPMNEYY 457
+ V LGW F+ + HSMG A Y P ++ LIL++ + +
Sbjct: 86 VRKVVVQLGWVKFSMIGHSMGASVAALYAGTFPSEVIDLILIEYRGPSVAGENLAREVLR 145
Query: 456 KSFYDAHYVDYHKQISERKAYSKEEAL--KAVVKARGVNREQAEIILSRNLIEIGDDRFV 283
+ D + Y +++ R+ +K L + + K + +E AE ++SR+ I D +
Sbjct: 146 ECADDLSRIHYKQKLQPRQEVAKFHQLVQRLMNKNPDITKESAERLMSRSGIP-EQDGYR 204
Query: 282 LSWDNRLKLLAPSNYPKEYYYELFSR---NSPPT-LLLRATEERGGSAD---RIQ--AVK 130
L D RLK N + + S+ NS T + RG RIQ ++
Sbjct: 205 LDIDQRLK--PAKNRDVRGNFMILSQEMINSILTGICCSVLVVRGNDCHPMFRIQDDYIR 262
Query: 129 EILTKMEENCGNFLIVSVTGGHDVHLTNPERCAKHISEFLDK 4
L ++++ + V G H VHL PE A+ I E+LD+
Sbjct: 263 ARLDVIKQHASEYFYHEVPGNHFVHLNEPEVVARVIREYLDR 304
>SB_16098| Best HMM Match : Abhydrolase_1 (HMM E-Value=4.5e-22)
Length = 863
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 648 FTPVIEYVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLD 508
F IE K LG F M HS+GG Y +P +K L+L+D
Sbjct: 631 FVESIENWRKELGIEKFILMGHSLGGFLTSSYALQHPEHVKHLVLVD 677
>SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)
Length = 299
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 591 MAHSMGGEQAMFYNAINPGQIKKLILLDVGLS 496
+ HSMGG+ M + P + KLI++DV S
Sbjct: 140 VGHSMGGKVGMTFALTYPEMVDKLIVVDVSPS 171
>SB_11988| Best HMM Match : Ank (HMM E-Value=5.1e-32)
Length = 639
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1
Query: 157 FSGQNTSRQGNPYQNGGELWEFSYRVSDGWT*RSSDK 47
++G+N SRQGN YQ G++ + RV G T R S K
Sbjct: 524 YNGKNPSRQGNTYQ--GKMPKNDDRVKVGGTPRRSRK 558
>SB_50673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 648 FTPVIEYVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLD 508
F IE K +G F + HS+GG Y P ++ LIL D
Sbjct: 124 FVQYIEEWRKAVGLEKFILLGHSLGGYLVTAYALKYPDRVHHLILSD 170
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 22/27 (81%)
Frame = +2
Query: 113 ILVRISLTACILSAEPPLSSVARSNKV 193
IL+ I +++C+L+AE PL+S ++ N+V
Sbjct: 921 ILLLIIVSSCMLAAEDPLNSNSKRNQV 947
>SB_37194| Best HMM Match : Pigment_DH (HMM E-Value=4.9)
Length = 371
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 221 MNCSRETLLPLYCCEPPKKEGVQRTEYKPSR-KSLPKWRRT 102
+N R+ LP + C P++ ++ EYK +R + +PK RT
Sbjct: 267 VNIPRQASLPKFSCS-PERSSIRSREYKYNRLRFVPKTSRT 306
>SB_13538| Best HMM Match : Pigment_DH (HMM E-Value=4.9)
Length = 223
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 221 MNCSRETLLPLYCCEPPKKEGVQRTEYKPSR-KSLPKWRRT 102
+N R+ LP + C P++ ++ EYK +R + +PK RT
Sbjct: 119 VNIPRQASLPKFSCS-PERSSIRSREYKYNRLRFVPKTSRT 158
>SB_33647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 613 GLDDVYMYGTFYGRRTSHVLQRYQSGPNKKTDSPRRG 503
GL DV+++ G R HV++ Y + +KT S RRG
Sbjct: 201 GLGDVFVFYPGEGYRNVHVIRGYDTAA-RKTRSLRRG 236
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 234 KEYYYELFSRNSPPTLLLRATEERGGSADRIQ 139
KE++Y+L S+ S P L+ + ER G ++Q
Sbjct: 919 KEFHYQLLSQGSSPLSHLKNSIERYGELPKLQ 950
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,104,230
Number of Sequences: 59808
Number of extensions: 503238
Number of successful extensions: 1415
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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