Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h11f
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88315-13|AAN84844.1| 359|Caenorhabditis elegans Hypothetical p... 40 0.002
U88315-12|AAB42367.1| 444|Caenorhabditis elegans Hypothetical p... 40 0.002
U88315-14|AAB42366.2| 355|Caenorhabditis elegans Hypothetical p... 38 0.004
Z81038-8|CAB02763.1| 328|Caenorhabditis elegans Hypothetical pr... 38 0.007
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 37 0.010
U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical pr... 31 0.86
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z68227-6|CAA92512.1| 410|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 29 3.5
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 28 6.0
U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical pr... 27 8.0
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 8.0
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 8.0
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 8.0
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 8.0
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 8.0
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 8.0
>U88315-13|AAN84844.1| 359|Caenorhabditis elegans Hypothetical
protein C37H5.3b protein.
Length = 359
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +1
Query: 151 PILLIHGRQDSVATYIPLLELLPDKYYYVGYDMPGHGKSD--AFPIGVKLSRLHFTPVIE 324
PI+LIHG VA + ++ L +D+PG G+S F + + IE
Sbjct: 77 PIVLIHGFGAGVALWGSAIKRLAQFQTVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIE 136
Query: 325 YVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLD 447
+ + HS GG A Y P +++ LIL D
Sbjct: 137 QWRDKMNLEKMNLVGHSFGGYLATSYALKYPKRVENLILAD 177
>U88315-12|AAB42367.1| 444|Caenorhabditis elegans Hypothetical
protein C37H5.3a protein.
Length = 444
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +1
Query: 151 PILLIHGRQDSVATYIPLLELLPDKYYYVGYDMPGHGKSD--AFPIGVKLSRLHFTPVIE 324
PI+LIHG VA + ++ L +D+PG G+S F + + IE
Sbjct: 162 PIVLIHGFGAGVALWGSAIKRLAQFQTVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIE 221
Query: 325 YVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLD 447
+ + HS GG A Y P +++ LIL D
Sbjct: 222 QWRDKMNLEKMNLVGHSFGGYLATSYALKYPKRVENLILAD 262
>U88315-14|AAB42366.2| 355|Caenorhabditis elegans Hypothetical
protein C37H5.2 protein.
Length = 355
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +1
Query: 151 PILLIHGRQDSVATYIPLLELLPDKYYYVGYDMPGHGKSD--AFPIGVKLSRLHFTPVIE 324
PI+LIHG VA + ++ L D+PG G+S F + + IE
Sbjct: 73 PIVLIHGFGAGVALWGSAIKRLAQFQNVYAIDLPGFGRSSRTKFSTDPETAEKEMIEAIE 132
Query: 325 YVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLD 447
+ + HS GG + Y P +I+ LIL D
Sbjct: 133 QWRVKMNLEKMNLVGHSFGGYLSTSYALKYPKRIENLILAD 173
>Z81038-8|CAB02763.1| 328|Caenorhabditis elegans Hypothetical
protein C25A1.12 protein.
Length = 328
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +1
Query: 136 NPRGDPILLIHGRQDSVATYIPLLELLPDKYYYVGYDMPGHGKSDA--FPIGVKLSRLHF 309
N G+ I+ I G VA + + +D G G+S F ++ L
Sbjct: 111 NLNGEAIVFIPGLGAGVAMFTANFNSCAKNHAVHSFDPLGFGRSSRSRFSDDNAIAELEM 170
Query: 310 TPVIEYVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQIKKLILLD 447
V+E K +G + H+ GG A Y NP ++ LIL+D
Sbjct: 171 VEVMEDWRKAMGIEKMYIIGHAFGGYLASAYALENPSRVAHLILVD 216
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 37.1 bits (82), Expect = 0.010
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Frame = +1
Query: 76 VLKEWT---IPLPWGKLTLVSWGNPRGDPILLIHGRQDSVATYIPLLELLPDKYYYVGYD 246
VL+ W I L +L V G+ +L IHG + ++ L+ DKY V D
Sbjct: 113 VLEGWDSRYIKLKKVRLHYVQTGSDDKPLMLFIHGYPEFWYSWRFQLKEFADKYRCVAID 172
Query: 247 MPGHGKSDAFPIGVKLSRLHFTPVIEYVAKHLGWTTFTCMAHSMGGEQAMFYNAINPGQI 426
G+ SD S T I V + LG+ +AH GG A + P +
Sbjct: 173 QRGYNLSDKPKHVDNYSIDELTGDIRDVIEGLGYDKAIVVAHDWGGLVAWQFAEQYPEMV 232
Query: 427 KKLILLDVGL--SLQRLQMVPMNEYYKSFYDAHY 522
KLI ++ S ++ +++ KS+Y Y
Sbjct: 233 DKLICCNIPRPGSFRKRIYTSWSQFRKSWYMFFY 266
>U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical
protein K07E3.7a protein.
Length = 1174
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 4 LNET*IKNLPCILHTYIILVTVMKVLKEWTIPLPWGKLTLVSWGNPRGDPI 156
+NE + N+ C++ T L+T M V +E I P K L++ DP+
Sbjct: 709 INELSVANIRCVMVTGDNLLTAMSVARECGIIRPTKKAFLITHSKTEKDPL 759
>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical
protein K07E3.7b protein.
Length = 1203
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 4 LNET*IKNLPCILHTYIILVTVMKVLKEWTIPLPWGKLTLVSWGNPRGDPI 156
+NE + N+ C++ T L+T M V +E I P K L++ DP+
Sbjct: 738 INELSVANIRCVMVTGDNLLTAMSVARECGIIRPTKKAFLITHSKTEKDPL 788
>Z68227-6|CAA92512.1| 410|Caenorhabditis elegans Hypothetical
protein F49C12.8 protein.
Length = 410
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 475 MVPMNEYYKSFYDAHYVDYHKQIS 546
++P+ EY +S+YD HY + Q++
Sbjct: 273 LIPVREYLESYYDCHYDRFFIQLA 296
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 421 QIKKLILLDVGLSLQRLQMVPMNEYYKSFYDA---HYVDYHKQISERKAYSKEEALKAVV 591
Q+ K + D +L++ + +E YK YD HY ++ER+ SKE K+V+
Sbjct: 155 QVNKKQVDDKIQALEKAALKKNDELYKEKYDEITRHYDRIRSSVAEREKTSKEVLKKSVL 214
Query: 592 KLE 600
E
Sbjct: 215 TSE 217
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 157 LLIHGRQDSVATYIPLLELLPDKYYYVGYDMPGHGKS 267
L++ GR+D + Y P L+ + + + ++G +P H S
Sbjct: 375 LIVDGRRDEIRQYAPELDWISNSFGFLG-SIPKHNPS 410
>U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical
protein K02F3.4 protein.
Length = 308
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 345 LDDVYMYGTFYGRRTSHVLQRYQSGPNKKTDSPRRGSF 458
LD+ Y T RR+ RY S PN T GSF
Sbjct: 85 LDEQTTYTTTMTRRSLPKADRYLSEPNMSTPQASHGSF 122
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 178 PDDRVLAVLDHPVDYPRIRALISPK 104
P D +L + HP Y RI+ + +PK
Sbjct: 1051 PKDAILGAVQHPRSYARIQEIEAPK 1075
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 178 PDDRVLAVLDHPVDYPRIRALISPK 104
P D +L + HP Y RI+ + +PK
Sbjct: 968 PKDAILGAVQHPRSYARIQEIEAPK 992
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 178 PDDRVLAVLDHPVDYPRIRALISPK 104
P D +L + HP Y RI+ + +PK
Sbjct: 1289 PKDAILGAVQHPRSYARIQEIEAPK 1313
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 178 PDDRVLAVLDHPVDYPRIRALISPK 104
P D +L + HP Y RI+ + +PK
Sbjct: 1289 PKDAILGAVQHPRSYARIQEIEAPK 1313
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 178 PDDRVLAVLDHPVDYPRIRALISPK 104
P D +L + HP Y RI+ + +PK
Sbjct: 1289 PKDAILGAVQHPRSYARIQEIEAPK 1313
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 178 PDDRVLAVLDHPVDYPRIRALISPK 104
P D +L + HP Y RI+ + +PK
Sbjct: 984 PKDAILGAVQHPRSYARIQEIEAPK 1008
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,483,440
Number of Sequences: 27780
Number of extensions: 327132
Number of successful extensions: 812
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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