Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h10r
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   7.0  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 NHVVHNLTLTLGSPFTPSPVTIKVAPEGGSCSL 272
           +H  +N+T     PF  + + + V P    C L
Sbjct: 209 SHPAYNMTFAQNGPFNTTTIFVPVKPCPWICEL 241


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
 Frame = -1

Query: 739 TMGHEDPPGNFERNKASLY--KLDSAKDGKLEKIIETVSLS----NGLAWDLKEKAFYYT 578
           T G+ DPP N E    +LY  K++        KI    S S    N        K     
Sbjct: 523 TFGNGDPPENGEAFAQNLYAMKMNETYINSGNKISLATSKSFIKANSQTEVSNSKKLDRL 582

Query: 577 DSMQFSITKFDYDVDTGEISNPR 509
           DS++ S T    + + G +SN R
Sbjct: 583 DSLRGSTTDSQTEDNFGPLSNVR 605


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 511 WGWIFLQYLHHNQISLS 561
           W WI L Y   N ISL+
Sbjct: 59  WRWIRLTYGQTNHISLT 75


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 511 WGWIFLQYLHHNQISLS 561
           W WI L Y   N ISL+
Sbjct: 97  WRWIRLTYGQTNHISLT 113


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 439 NLWVAVFGGSCVLKINPKNGEILQKLAIPAEQV 341
           N+WV        LK NP+    ++ L +P+E +
Sbjct: 83  NVWVEQRWNDYKLKWNPEEYGGVEMLYVPSENI 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,490
Number of Sequences: 438
Number of extensions: 5105
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)