Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h10f
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 0.95
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 27 1.7
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 27 2.2
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 27 2.9
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 27 2.9
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 3.8
SPBC18A7.02c |||seven transmembrane receptor-like protein|Schizo... 26 3.8
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 26 5.1
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 6.7
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 25 8.8
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz... 25 8.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 0.95
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 428 LPSSPSHCMKRNLRSTPTTNWSVVPSTGNMKPTLPSKL 315
LPS PS R TP T +++P G M P K+
Sbjct: 509 LPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKV 546
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 178 IEKITEPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 345
I + E G P WDE+++AL F Q K +P T + T R F L
Sbjct: 516 ISAVDESAHQGHLPGWDEKEEALIFSLAQGMNPMK-MPLTPRRASTGPRPRPTFQL 570
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 68 GASKASEFSRLNSAKCNKPKGLLHFAWLKNHIRC 169
G+S++ F + S KC + + WLK I C
Sbjct: 355 GSSESGVFFEMQSVKCKVAQEIQDHGWLKKLIYC 388
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 26.6 bits (56), Expect = 2.9
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +1
Query: 94 STKFSKV**AKRLITLCLVK---KPYTMSVRIEKITEPLTLGEGPHWDERQ-QALYFVSI 261
ST F + L+ LVK K Y M R+ + P L D Q A+ +I
Sbjct: 248 STSFDSILGNGVLVITTLVKELEKGYMMLFRLVRDRSPYFL------DSLQLHAINLSAI 301
Query: 262 QDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVV 378
+ K + K V + K K SL+ + LP+EGT F V
Sbjct: 302 KSKHLQKIVVLSSKG-KVSLESPMSPSLPIEGTFRSFRV 339
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 558 TWRIFMTHSSSKQPPTRICFA 496
T+R F T SS+K P +CFA
Sbjct: 21 TFRKFTTESSTKSPIADVCFA 41
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 413 SHCMKRN--LRSTPTTNWSVVPSTGNMKPTLPSKLV 312
SH N + + P N S VP+TGN+K L V
Sbjct: 1095 SHAAHSNNVIGTQPHVNVSAVPNTGNLKDALEGSAV 1130
>SPBC18A7.02c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 317 LVFVCFSVVGTYLCIVLSWMLTKYS 243
++F C V+ L ++LSW T+YS
Sbjct: 248 ILFACQLVLDLALLLILSWGYTRYS 272
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 245 YTL*ASKIKLYTNMYQLLKNI 307
Y + A+K K +T YQLLKNI
Sbjct: 717 YHVSATKKKEFTRQYQLLKNI 737
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 221 WGPSPSVRGSVIFSILTDIVYGFLTKQS 138
W PS + G ++F IL D+ F+ QS
Sbjct: 134 WSPSSFLLGKIVFLILVDL--NFIISQS 159
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 344 YQWKVQQTNL*WESNASSFSYSGMER 421
Y W + WES++S FS M+R
Sbjct: 293 YDWMLLNDGKGWESSSSHFSVVAMKR 318
>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 211 EGPHWDERQQALYFVSIQDKTIHKYVPTTEKH 306
EGP W Y D I VPT EK+
Sbjct: 392 EGPRWTVSDPPTYAKQTIDSNICVLVPTAEKN 423
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,530,584
Number of Sequences: 5004
Number of extensions: 55516
Number of successful extensions: 154
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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