Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h10f
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   5.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.8  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 521 CLLELWVMKILQVTL 565
           CLLE+ + KILQ+T+
Sbjct: 234 CLLEVTLQKILQLTI 248


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -1

Query: 417  SIPLYEKELAFDSHYKLVCCTFHW*YETNPPI*TGFCMFFSSWYIFVYSFILDAHK 250
            SI LY    +      L   T H  Y  N PI + F +F   +Y+F +   L++ +
Sbjct: 911  SISLYVPSRSLRPRDPLSIETRHTLYTFNDPILSCFRLFNHFYYLFDFDSSLNSFR 966


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,817
Number of Sequences: 2352
Number of extensions: 11760
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)