Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h09r
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4BAX0 Cluster: Uncharacterized secreted protein; n=1; ...    33   7.3  
UniRef50_Q7REN3 Cluster: Putative uncharacterized protein PY0503...    33   7.3  

>UniRef50_A4BAX0 Cluster: Uncharacterized secreted protein; n=1;
           Reinekea sp. MED297|Rep: Uncharacterized secreted
           protein - Reinekea sp. MED297
          Length = 241

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 637 LLHNAIPL*MLVHISLWNWYLFQDRFTVDILRYTGRRLRVRITIRFENIY 488
           L    +PL    H+  WNW  +QD F+    RYTGR+     T R   +Y
Sbjct: 63  LFRGILPL--AFHVDYWNWLGWQDPFS--HTRYTGRQQAYAETKRLSQVY 108


>UniRef50_Q7REN3 Cluster: Putative uncharacterized protein PY05031;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05031 - Plasmodium yoelii yoelii
          Length = 1123

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 33  NTHDLISSLLNSITGFKHYKYSNRMSLKIYLIYN 134
           N H+  + L+N I+ F  Y Y+N  S  IY  YN
Sbjct: 17  NNHNNTTILMNKISYFSFYSYNNTQSNNIYYTYN 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,048,674
Number of Sequences: 1657284
Number of extensions: 11633194
Number of successful extensions: 19383
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19354
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)