Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h09r
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0521 + 3867922-3867967,3868282-3868544,3868680-3868744,386...    28   8.9  
02_01_0378 - 2736361-2738355                                           28   8.9  

>07_01_0521 +
           3867922-3867967,3868282-3868544,3868680-3868744,
           3868828-3868990,3869798-3869946,3870041-3870289,
           3870860-3871028,3871110-3871202,3871703-3871952,
           3872127-3872217,3872673-3872769
          Length = 544

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -3

Query: 392 FFAMNKLNN*KM*LGYIRDVNPILLLENVCLINFYLKSTAV*KVALLAMI 243
           FF  NKL      LG ++ V  I  L  V L N++LK+  + K+ L   I
Sbjct: 310 FFITNKLGFTPEFLGRVKLVTSIASLLGVGLYNYFLKAVPLRKIFLATTI 359


>02_01_0378 - 2736361-2738355
          Length = 664

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 513 ILTRKRRPVYLSISTVNRSWNRYQF 587
           +L+ K RPV   + T++RSW +  F
Sbjct: 419 LLSEKYRPVLAQVLTIHRSWRKETF 443


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,077,301
Number of Sequences: 37544
Number of extensions: 269981
Number of successful extensions: 411
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)