Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h09r
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.8  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   9.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 626  RYPFIDVGSYKLVE 585
            R+P +D+G Y+LV+
Sbjct: 1319 RHPIVDLGPYRLVD 1332


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 504  LIVILTRKRRPVYLSISTVNRSWN 575
            LIV +       YL  S  N+SWN
Sbjct: 2690 LIVSIVTAAVGAYLGASAANKSWN 2713


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 24  YYANTHDLISSLLNSITGFKHYKYSNRMS 110
           YY   HD +S+ L ++ G+K     N+++
Sbjct: 48  YYNEKHDPLSAHLFNLEGYKWKSLRNKIT 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,898
Number of Sequences: 2352
Number of extensions: 12937
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)