Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h08f
(592 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 64 6e-11
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 52 4e-07
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 46 3e-05
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 46 3e-05
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 40 0.002
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.005
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 38 0.005
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 36 0.025
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 35 0.043
SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13) 35 0.057
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 31 0.53
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 31 0.53
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 31 0.53
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 30 1.2
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 29 2.1
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 29 2.1
SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_29137| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 28 5.0
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 28 5.0
SB_4913| Best HMM Match : CBF (HMM E-Value=2.9) 28 5.0
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5) 28 5.0
SB_32709| Best HMM Match : Spectrin (HMM E-Value=8.8) 28 5.0
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 28 5.0
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84) 28 6.6
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 28 6.6
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 8.7
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 27 8.7
SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 8.7
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +2
Query: 260 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 439
P + IV+G V ++AFL CCGA++ES CM+ TY + Y E I++
Sbjct: 59 PILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEK 118
Query: 440 SIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGN 553
++ + + + D A+ E+ R F+CCGN
Sbjct: 119 NLHGDIRSTMNEYHLSGHDAVTRAI-DEIHRDFKCCGN 155
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +2
Query: 272 IVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESIMD 451
I+VG +MF++ F GC GA+RE+ C++ ++ F + + ++ I++
Sbjct: 51 IIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVE 110
Query: 452 GVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTG 559
+ K D NAD + + +Q++F+CCG G
Sbjct: 111 KLQTAVTKYRD-NAD--LQNLIDGVQQEFKCCGAKG 143
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/110 (22%), Positives = 47/110 (42%)
Frame = +2
Query: 230 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXX 409
+L G I I VGA + +++F GCCGAI+E C++ T+
Sbjct: 316 ELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTAL 375
Query: 410 XFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTG 559
+ Y ++E + + + + +A + +Q++ +CCG G
Sbjct: 376 GYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDA-YDAIQKKEKCCGING 424
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +2
Query: 257 GPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIK 436
G + I VG ++ +IAF GCCGA +E+ CM++ + + + I+
Sbjct: 406 GSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQ 465
Query: 437 ESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAIN---YGQ 577
+ D + K+ N +A +Q FECCG G + YGQ
Sbjct: 466 SDLTDDIIRNIKEYPKNN-----KAAIDAMQMDFECCGAKGPSDWTFYGQ 510
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/107 (23%), Positives = 50/107 (46%)
Frame = +2
Query: 230 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXX 409
++ + A GP + I VG ++ ++AFLGCCGA +E+ CM++ +
Sbjct: 44 EIASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGAL 103
Query: 410 XFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
+ + I+ + + ++ N E +++Q +F+CCG
Sbjct: 104 AYNNKDKIENRLDKDI-----LKAIENYPGKNEKSINDMQTKFKCCG 145
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
IF V+G +MF I F GC GA+RE+ C + Y +T + + +++
Sbjct: 80 IFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKV-QAL 138
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
+ + KK D D + + +Q +CCG
Sbjct: 139 KERLKQDLKKYLD---DPLNQDLIDFMQTLLKCCG 170
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Frame = +2
Query: 251 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTY-GE 427
A G + I VG ++ +++F GC GA +E+ CM+ T+ + Y G+
Sbjct: 53 ATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGK 112
Query: 428 S--------IKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY 571
+ +K+ I + K ++ + F LQ + +CCG G +++
Sbjct: 113 NSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDW 168
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 230 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMV 349
DL A G I I GA++ +I+F GCCGAI+ES C++
Sbjct: 16 DLQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
IF+ +G ++FVI GC GA+RE+ C++ Y F Y + ++ +
Sbjct: 106 IFLALGGLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKV 165
Query: 446 MDGV-GVLFKKRSDANADEAAEAVFSELQRQFECCGNTG 559
+ + R D + +Q + +CCG G
Sbjct: 166 TAQLKDAIVLYRDPTKGD--LHLIIDTVQTELQCCGVQG 202
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 251 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 355
++ W I GA + + F GCCGA++ES CM+ T
Sbjct: 311 SIPAWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
+ ++VG ++F+IA +GC GA+RE+ ++ Y + + + + E +
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKL 143
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
D + K D + E + + LQ +CCG
Sbjct: 144 KDDL----KHYRDPD-KENFQFLIDRLQTNLKCCG 173
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 236 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 355
L +H A +I I +G ++ +I F+GCCGA++E C++ T
Sbjct: 208 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 248
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 236 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 355
L +H A +I I +G ++ +I F+GCCGA++E C++ T
Sbjct: 66 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVV 352
I I GA++ I F+GCCGA++E+ C ++
Sbjct: 201 IMIAAGALVMFIGFVGCCGAVKENKCFLL 229
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +2
Query: 266 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 445
+ ++VG ++F+IA +GC GA+RE+ ++ Y + + + + +
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKL 143
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
D + + D + E + + LQ +CCG
Sbjct: 144 KDDL----QHYRDPD-KENFQFLIDRLQTNLKCCG 173
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/105 (20%), Positives = 41/105 (39%)
Frame = +2
Query: 236 LKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXF 415
L++ + P + G +++I F GC GA++E+ + +Y F
Sbjct: 65 LQSFMLYMPTLLFFTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAF 124
Query: 416 TYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 550
+E ++D L D + + +Q +F+CCG
Sbjct: 125 LQ----REKLVDPKARLEDGLKSYQQDSSKQEFIDFIQTRFKCCG 165
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 245 HLAVGPWIFIVV-GAVMFVIAFLGCCGAIRES 337
+LA P + + + G +MFVI+F GC GA+RE+
Sbjct: 13 NLATDPAVMLAIAGVLMFVISFSGCLGALREN 44
>SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13)
Length = 347
Score = 34.7 bits (76), Expect = 0.057
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 430 ALAVGEEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQER 302
AL GE+ + + L NDDH ++D + DD L + S+E+
Sbjct: 47 ALHEGEDVEGDDDLDNDDHDEDDVLADDSVDDLVAEESLSEEK 89
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 271 EDPRTDSKMGLQ*VFDHGPVHQERYSNP 188
+DP +DS +G+ VFDHG + E Y P
Sbjct: 5 DDPLSDSNLGIS-VFDHGSTYSEPYEIP 31
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -1
Query: 412 EEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQE--RDHEHYSPDDYEDPRTD 254
++ H H DH R DH +Y T + DH + D+ DP TD
Sbjct: 359 DQVTGHSDHVTDHNDHVTGRSDHVTGHSYHVTGHNDYLTDHNDHVTTDHSDPLTD 413
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 433 DALAVGEEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHY 287
DA A ++D + +DD +D DD V++ +RS E+D E Y
Sbjct: 657 DAAAAAADDDDDADDDDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 705
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -1
Query: 409 EDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRTDS 251
+D +HH + DH ++D V V + + +D +H+ D PR D+
Sbjct: 639 QDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHR-QDVVHPRQDA 690
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 382 DDHQQEDCVRDDHAVTLAYRSTASQERD-HEHYSPDDYEDPRT 257
DDH Q+ V ++ A+T + QE H+H+ P D + R+
Sbjct: 922 DDHSQQSNV-EEQAMTATHNRKVDQESSTHDHHMPRDVRETRS 963
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/91 (28%), Positives = 40/91 (43%)
Frame = -1
Query: 415 EEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRTDSKMGLQ 236
EEE+ N HL N D + E+ + + R + +E E + DD + D G+
Sbjct: 157 EEEEENGHLMNGDSKTEEKKNANGKMGQKERHSEDEE---EKENKDDSKSADKDDDKGV- 212
Query: 235 *VFDHGPVHQERYSNPH*QQAEERDDQVEEE 143
D V +E S Q EE +++ EEE
Sbjct: 213 ---DEKGVDEEGASEEP-QDGEEEEEEEEEE 239
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 260 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 358
P + I G ++ ++ +GC I+E+ ++V+Y
Sbjct: 60 PGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92
>SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 292 VRDRVLGMLWSDTRESLHGRHVRNLLAGDHHCAS 393
++D V G W++ + +LH + LAGD C+S
Sbjct: 313 IQDEVQGFHWNNAKATLHPFMIYYKLAGDLQCSS 346
>SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 430 ALAVGEEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHY 287
A A +++D +DD +D DD V++ +RS E+D E Y
Sbjct: 379 AAAADDDDDDADDDDDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 426
>SB_29137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = -2
Query: 324 APQHPKNAITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKK 145
APQ P+NA T I PT + P A + ++ + + T S RS L+K
Sbjct: 1 APQQPQNATTAIMTPTAINSLDPEAYSILERARVKFALLSHLPKAFTLS--RSDVILLRK 58
Query: 144 NSTYFTKLVPHPMLR 100
+ TK + + LR
Sbjct: 59 GD-FVTKTLNNDPLR 72
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 421 VGEEEDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYED 266
V EEE + +DD+ +D +D TL TA + R YS D +D
Sbjct: 537 VSEEECHKGVVDDDDNDDDDDDENDVRKTLLGSETADENRGESVYSFHDADD 588
>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
Length = 1191
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 195 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 73
PIP P + T ++K YFTK P MLR F++ + +
Sbjct: 118 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 157
>SB_4913| Best HMM Match : CBF (HMM E-Value=2.9)
Length = 328
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQR 532
+ G+G++FK+R+ N +F ELQR
Sbjct: 55 LKGLGLMFKQRTGRNLPMTHPVIFDELQR 83
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = -1
Query: 544 AFELSLQFREDSLGGLVCVSVRSLFE*HADAIHNALLDALAVGEEEDANHHLHNDDHQQE 365
A E++L+ R + VS L H++ ++ + + + +D H+DD ++
Sbjct: 334 AMEMNLEDRTKGFVISLVVSEDKLPPGHSEDEYDKEHEEASKDDHQDDKEAEHHDDKDEQ 393
Query: 364 DCVRDDHAVTLAYRSTASQERDHEHYSPDDYED 266
+D+H + E +H+ DD+ED
Sbjct: 394 HDDKDEHRDD---KDDHHDEDEHDEKKGDDHED 423
>SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)
Length = 168
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 328 YRSTASQERDHEHYSPDD 275
YR T SQ R H H++PD+
Sbjct: 104 YRRTRSQLRPHHHFAPDE 121
>SB_32709| Best HMM Match : Spectrin (HMM E-Value=8.8)
Length = 230
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 446 MDGVGVLFKKRSDANADEAAEAVFSELQR 532
+ G+G++FK+R+ N +F ELQR
Sbjct: 55 LKGLGLMFKQRTGRNLPMTHPVIFDELQR 83
>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
Length = 399
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 328 YRSTASQERDHEHYSPDD 275
YR T SQ R H H++PD+
Sbjct: 336 YRRTRSQLRPHHHFAPDE 353
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 195 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 73
PIP P + T ++K YFTK P MLR F++ + +
Sbjct: 684 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 723
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = -1
Query: 409 EDANHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEH----YSPDDYEDPRT-DSKM 245
+ H H + QQ+ ++ + R + +R+ + SP D+E +
Sbjct: 388 QQQQHQQHEE--QQQRLLKQQEGLCEQIRQLENHQREVQSNLSMLSPRDHELAEIRQHEA 445
Query: 244 GLQ*VFDHGPVHQERYSNPH*QQAEERDDQVEEE*HIFHKTR 119
+ + D +HQ +Y H +Q + DDQ IFH+ R
Sbjct: 446 QIVSLLDEQKMHQRQYEQMHQRQQQRLDDQA----RIFHRDR 483
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 106 HGMWNEFCEICAILLQ--PGRRAPRPAASGDWSSVPDELDHGQRLTEDPSCCRSVDLHSR 279
H W+ +L P R A P A+ + +P+ + + ++ + PSC + +
Sbjct: 159 HAPWDVLTRFAEKMLLRFPLREASPPPAAQGFDKIPELISNWSKIFDPPSCGITKEKRFV 218
Query: 280 RGCNVRDRVLGMLWSD 327
G RD+ L SD
Sbjct: 219 HGLFSRDKKDSFLISD 234
>SB_44575| Best HMM Match : DUF444 (HMM E-Value=0.84)
Length = 451
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -1
Query: 217 PVHQERYSNPH*QQAEERDDQVEEE*HIFHKTRSTSHVESTIFYFCFTINTSLAVRSGYV 38
P E N ++AEE DD + EE F + S++ Y C+ + V++ V
Sbjct: 151 PPEMEEDDNTEDEEAEEDDDFMSEEEPEFQPSAEESYLSEDEEYNCW---KNPLVQTKTV 207
Query: 37 GTAFSV 20
GT SV
Sbjct: 208 GTCISV 213
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = -1
Query: 415 EEEDANHH--LHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRTDSKMG 242
+EE N H H+++ ED D + +ER++EH +D D +++
Sbjct: 40 DEERNNEHEDRHDEERNDEDEDGHDEERNNEHEDRHDEERNNEH---EDRHDEERNNEEE 96
Query: 241 LQ*VFDHGPVHQERYSNPH*QQAEERDDQVEEE*H 137
+ + H++R+ + E+R D+ H
Sbjct: 97 DKHDEERNNEHEDRHDEERNNEDEDRHDEERNNEH 131
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 195 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFI 85
PIP P + T ++K YFTK P MLR F++
Sbjct: 86 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWL 121
>SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 228
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/62 (22%), Positives = 22/62 (35%)
Frame = -1
Query: 328 YRSTASQERDHEHYSPDDYEDPRTDSKMGLQ*VFDHGPVHQERYSNPH*QQAEERDDQVE 149
Y RDH H D +D D + DH H + + H + +D +
Sbjct: 68 YHHKKGHHRDHHHKDHKDQKDHAKDQSKDHKDQKDHAKDHSKDHPKDHPKNHPSKDQKGS 127
Query: 148 EE 143
+E
Sbjct: 128 KE 129
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 195 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 73
PIP P + T ++K YFTK P MLR F+ + +
Sbjct: 82 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWFQLQR 121
>SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 379
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/62 (22%), Positives = 22/62 (35%)
Frame = -1
Query: 328 YRSTASQERDHEHYSPDDYEDPRTDSKMGLQ*VFDHGPVHQERYSNPH*QQAEERDDQVE 149
Y RDH H D +D D + DH H + + H + +D +
Sbjct: 9 YHHKKGHHRDHHHKDHKDQKDHAKDQSKDHKDQKDHAKDHSKDHPKDHPKNHPSKDQKGS 68
Query: 148 EE 143
+E
Sbjct: 69 KE 70
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 313 SQERDHEHYSPDDYEDPRTDSKMG--LQ*VFDHGPVHQERYSNPH*QQAEERDDQVEEE 143
S+E D +HY DD D D K+G +Q FD P+ +ER + DD ++E
Sbjct: 218 SEEYD-DHYDGDDNFDNYNDDKVGDEVQDDFD-DPIREEREAQKQYWDDGSHDDGSKDE 274
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,781,782
Number of Sequences: 59808
Number of extensions: 344350
Number of successful extensions: 1299
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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