Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h08f
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   1.8  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   1.8  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    25   1.8  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   2.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.8  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 121 RSTSHVESTIFYFCFTINTSLAVRSGYVGTAFSVHGVNTT 2
           R  SH +S++   C   NT+      Y+   F+ H  + T
Sbjct: 36  RQGSHAKSSVHKLCHARNTTQPRTRWYIPAFFAAHPTDRT 75


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 121 RSTSHVESTIFYFCFTINTSLAVRSGYVGTAFSVHGVNTT 2
           R  SH +S++   C   NT+      Y+   F+ H  + T
Sbjct: 36  RQGSHAKSSVHKLCHAKNTTRPRTRWYIPAFFAAHPTDRT 75


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 121 RSTSHVESTIFYFCFTINTSLAVRSGYVGTAFSVHGVNTT 2
           R  SH +S++   C   NT+      Y+   F+ H  + T
Sbjct: 36  RQGSHAKSSVHKLCHAKNTTRPRTRWYIPAFFAAHPTDRT 75


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 451 IHNALLDALAVGEEEDANHHLHN 383
           IH+ALL+A+  G  E     LHN
Sbjct: 924 IHDALLEAVICGSTEVPARSLHN 946


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 436  LDALAVGEEEDANHHLHNDDHQQEDCVRDDHAV 338
            L+     ++ED +    +DD + EDC  + H +
Sbjct: 1190 LNGAGNNDDEDEDDD-EDDDDEDEDCADEQHPI 1221


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 428  SIKESIMDGV-GVLFKKRSDANADEAAEAVFSELQRQF 538
            ++  +I  G+  + FKK+ +  A E +    S++ +QF
Sbjct: 3165 TVVRNIASGLRNLFFKKKPEQQAHEVSTLEHSQIDKQF 3202


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 428  SIKESIMDGV-GVLFKKRSDANADEAAEAVFSELQRQF 538
            ++  +I  G+  + FKK+ +  A E +    S++ +QF
Sbjct: 3168 TVVRNIASGLRNLFFKKKPEQQAHEVSTLEHSQIDKQF 3205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,009
Number of Sequences: 2352
Number of extensions: 10882
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)