Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h08f
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    61   7e-12
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   0.97 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.0  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 61.3 bits (142), Expect = 7e-12
 Identities = 30/85 (35%), Positives = 41/85 (48%)
 Frame = +2

Query: 107 MGCGTSFVKYXXXXXXXXXXXXXXXXXXXXXXXXMNWTMVKDLLKTHLAVGPWIFIVVGA 286
           M CG   +KY                        +    V   ++T LA      IV+G+
Sbjct: 1   MSCGMGMIKYLLFIFNFVFAVCGLGILTLGVLIHLQILGVSKQIETGLAFPSITLIVLGS 60

Query: 287 VMFVIAFLGCCGAIRESHCMVVTYA 361
           ++FVI+F GCCGAIRESHCM +T+A
Sbjct: 61  IIFVISFFGCCGAIRESHCMTITFA 85


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 470 KKRSDANADEAAEAVFSELQRQ 535
           +KR DA  DE+ EA+F  + RQ
Sbjct: 292 EKRDDAK-DESVEAIFQSILRQ 312


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 434 KESIMDGVGVLFKKRSDANADEAAEAVFSELQR 532
           K S+M   G+  +     + DE    VFS LQR
Sbjct: 96  KRSLMGAQGLSIRGLQINHEDETIRPVFSTLQR 128


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = -1

Query: 400 NHHLHNDDHQ-QEDCVRDDH 344
           +HHL N  H  Q   V+D H
Sbjct: 141 HHHLQNHHHHLQSTAVQDHH 160


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 143 IAHISQNSFHIPC*EHYFLFLFHN 72
           I + S +SF+IPC     +FL++N
Sbjct: 344 IIYSSLSSFYIPC--IIMVFLYYN 365


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 340 LHGRHVRNLLAGDHHCAS 393
           LH   ++N+   DHH AS
Sbjct: 349 LHSFQMKNVTIVDHHTAS 366


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 92  FLFLFHNKHFT 60
           F FL+ NKHFT
Sbjct: 202 FGFLYLNKHFT 212


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 92  FLFLFHNKHFT 60
           F FL+ NKHFT
Sbjct: 202 FGFLYLNKHFT 212


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,883
Number of Sequences: 438
Number of extensions: 3058
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)