Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h06r
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...   101   3e-23
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   6.1  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   6.1  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   6.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   6.1  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score =  101 bits (241), Expect = 3e-23
 Identities = 47/92 (51%), Positives = 60/92 (65%)
 Frame = -1

Query: 707 GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF 528
           GKKYKM  SE FD++M  +GVG++ RK  N+++PTVEL K+GDEY   T S  +T     
Sbjct: 35  GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSS 94

Query: 527 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 432
               EF+E+  DG  VKSVCTF+GN L   QK
Sbjct: 95  SWAMEFDEETVDGRMVKSVCTFDGNKLIHEQK 126


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 629 KAANAVTPTVELRKDGDEYNLVTSST 552
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 629 KAANAVTPTVELRKDGDEYNLVTSST 552
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 629 KAANAVTPTVELRKDGDEYNLVTSST 552
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +1

Query: 58  NVFLNTINASRACAPLLLPWSLNLFKFRHRHSLLQFER*TMTDVKT 195
           ++ + TI+ ++AC   L    +    F     + Q+ER   T ++T
Sbjct: 630 HIVVETIDTAKACIEFLKQHDIGRASFIALEKIQQYERNCHTQIQT 675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,463
Number of Sequences: 2352
Number of extensions: 14223
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)