Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h05r
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   7.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.4  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 743 CVARGFAFRCEQTDRVHSTSRTG 675
           C A G  F C +  +VH+ + TG
Sbjct: 206 CKACGKGFTCSKQLKVHTRTHTG 228


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 53  VQGLLLLVRSDRLGHVAHYPVDHVLLGETALHVRLLEL 166
           ++  LL   +DRLG +   P +       ++H++L +L
Sbjct: 252 IEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLPKL 289


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 435 MWLT*NSDQNWLLGW 391
           +W   + DQ W+L W
Sbjct: 595 LWYVPSLDQVWILNW 609


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,507
Number of Sequences: 438
Number of extensions: 4239
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)