Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h05f
(588 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.47
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.47
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.47
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.47
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 25 0.47
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 23 1.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.5
AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein. 22 4.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 5.8
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 7.7
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 7.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.47
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 397 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 477
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.47
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 397 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 477
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.47
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 397 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 477
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.47
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 397 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 477
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 25.0 bits (52), Expect = 0.47
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 241 PGSPLTGRAKVFWSCVATSEAEPRATSAVH 152
P P T RAK++ CV T+ P A S ++
Sbjct: 21 PSRPKT-RAKIYALCVVTALVTPSALSIIY 49
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -2
Query: 386 VIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPF 270
VIF L+Y+ + V + +R H F + L F
Sbjct: 261 VIFELYYLSHVCQNVSTEVIGNILRLMHRRFEITALRLF 299
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -2
Query: 491 PFVLGRFNFLVQPSSQFWSEFHVSHIH 411
P + G ++L + FW+E ++H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205
Score = 21.4 bits (43), Expect = 5.8
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 397 HCWSWCMWL 423
H W W +WL
Sbjct: 450 HAWIWLVWL 458
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.5
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -2
Query: 491 PFVLGRFNFLVQPSSQFWSEFHVSHIH 411
P + G ++L + FW+E ++H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205
Score = 21.4 bits (43), Expect = 5.8
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 397 HCWSWCMWL 423
H W W +WL
Sbjct: 450 HAWIWLVWL 458
>AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein.
Length = 46
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 314 RTRHTSFRVEELEPFF 267
RT TS+++EELE F
Sbjct: 1 RTTFTSYQLEELEKAF 16
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 5.8
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 397 HCWSWCMWL 423
H W W +WL
Sbjct: 217 HAWIWLVWL 225
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 381 IRAPLHRFPCCTGMLPDPHQKCKDP 307
I P HRF G++ DP +DP
Sbjct: 373 IHDPDHRFLEPFGVMADPAVDLRDP 397
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 375 HEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEG 500
+ YYS + L ++H +FG L K + + +N G
Sbjct: 256 YPYYSNMDYLSSSTMSHSQFGNGLETSWGKSRDESSWFYNSG 297
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,017
Number of Sequences: 336
Number of extensions: 3282
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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