BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10h05f (588 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b... 102 8e-22 BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transp... 102 1e-21 BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transp... 102 1e-21 AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-indu... 102 1e-21 AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transp... 102 1e-21 AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transp... 102 1e-21 BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transp... 100 8e-21 AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transp... 64 4e-10 BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. 31 4.0 BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 rece... 31 4.0 AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein... 31 4.0 AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 rece... 31 4.0 AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 rece... 31 4.0 AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 7.0 AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 7.0 AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 7.0 AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 7.0 AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 7.0 AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 7.0 >X60221-1|CAA42782.1| 256|Homo sapiens H+-ATP synthase subunit b protein. Length = 256 Score = 102 bits (245), Expect = 8e-22 Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >BC016350-1|AAH16350.1| 256|Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 protein. Length = 256 Score = 102 bits (244), Expect = 1e-21 Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >BC005366-1|AAH05366.1| 256|Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 protein. Length = 256 Score = 102 bits (244), Expect = 1e-21 Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >AY871272-1|AAX11428.1| 256|Homo sapiens cell proliferation-inducing protein 47 protein. Length = 256 Score = 102 bits (244), Expect = 1e-21 Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >AL390195-7|CAC36042.1| 256|Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 protein. Length = 256 Score = 102 bits (244), Expect = 1e-21 Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >AK223018-1|BAD96738.1| 256|Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b isoform 1 pr protein. Length = 256 Score = 102 bits (244), Expect = 1e-21 Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >BC005960-1|AAH05960.1| 256|Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 protein. Length = 256 Score = 99.5 bits (237), Expect = 8e-21 Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 7/167 (4%) Frame = +3 Query: 105 MLSRVALRSGASKQTAC--TALVARGSASDVAT-HDQKTFARPVRGEP---GKVRLGFIP 266 MLSRV L + A+ + A + G T H + PV P GKVR G IP Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60 Query: 267 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPK 443 EE+FQF + KTGVTGPY G GL Y SK IYV+ E ++ LS+L VMVY K+GP Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVY-GIKKYGPF 119 Query: 444 LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 +A + DK E + E + +++ +++AI+ EK++Q Q + L Sbjct: 120 VADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 166 >AL390195-8|CAI15628.1| 195|Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 protein. Length = 195 Score = 64.1 bits (149), Expect = 4e-10 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 1/99 (1%) Frame = +3 Query: 291 SKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLL-VMVYVAHVKFGPKLAAWLDKE 467 S GPY G GL Y SKEIYV+ E ++ LS+L VMVY K+GP +A + DK Sbjct: 8 SAAATAGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVY-GIKKYGPFVADFADKL 66 Query: 468 VEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELL 584 E + E + +++ +++AI+ EK++Q Q + L Sbjct: 67 NEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYL 105 >BC119788-1|AAI19789.1| 626|Homo sapiens APOB48R protein protein. Length = 626 Score = 30.7 bits (66), Expect = 4.0 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Frame = +3 Query: 234 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 413 E + G + EW HS T GP G +E E E L+L Sbjct: 67 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 126 Query: 414 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGEKTEQWRAQGQEL 581 ++ GP+ A + E EA W + ++ EDA +GE+ E+ G + Sbjct: 127 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 186 Query: 582 L 584 L Sbjct: 187 L 187 >BC119786-1|AAI19787.1| 1088|Homo sapiens apolipoprotein B48 receptor protein. Length = 1088 Score = 30.7 bits (66), Expect = 4.0 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Frame = +3 Query: 234 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 413 E + G + EW HS T GP G +E E E L+L Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588 Query: 414 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGEKTEQWRAQGQEL 581 ++ GP+ A + E EA W + ++ EDA +GE+ E+ G + Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648 Query: 582 L 584 L Sbjct: 649 L 649 >AF141334-1|AAF78765.1| 1076|Homo sapiens placenta apolipoprotein B48 receptor type 2 protein. Length = 1076 Score = 30.7 bits (66), Expect = 4.0 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Frame = +3 Query: 234 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 413 E + G + EW HS T GP G +E E E L+L Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588 Query: 414 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGEKTEQWRAQGQEL 581 ++ GP+ A + E EA W + ++ EDA +GE+ E+ G + Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648 Query: 582 L 584 L Sbjct: 649 L 649 >AF141333-1|AAF76256.1| 1088|Homo sapiens apolipoprotein B48 receptor protein. Length = 1088 Score = 30.7 bits (66), Expect = 4.0 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Frame = +3 Query: 234 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 413 E + G + EW HS T GP G +E E E L+L Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588 Query: 414 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGEKTEQWRAQGQEL 581 ++ GP+ A + E EA W + ++ EDA +GE+ E+ G + Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648 Query: 582 L 584 L Sbjct: 649 L 649 >AF141332-1|AAF76255.1| 1088|Homo sapiens apolipoprotein B48 receptor protein. Length = 1088 Score = 30.7 bits (66), Expect = 4.0 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Frame = +3 Query: 234 EPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMV 413 E + G + EW HS T GP G +E E E L+L Sbjct: 529 EAAQTSCGLLGVEWGGLTHSVTKGQGPELMGGAQTPTKQPEEREAGEVELMGVLALSKEE 588 Query: 414 YVAHVKFGPKLAAWLDKEV-EATENEWNEGRNQTVK---ALEDAIEGEKTEQWRAQGQEL 581 ++ GP+ A + E EA W + ++ EDA +GE+ E+ G + Sbjct: 589 QERSLEAGPRHAGSVKPEASEAFPGAWENRTRKDMERGNTQEDAADGEQREEEETAGGQT 648 Query: 582 L 584 L Sbjct: 649 L 649 >AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 904 Score = 29.9 bits (64), Expect = 7.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 495 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 319 RS R R + P P ++ VR R+ H+ P +S +P T LP+P K Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229 Query: 318 CKDPSHQ 298 K+PS Q Sbjct: 230 VKEPSVQ 236 >AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 913 Score = 29.9 bits (64), Expect = 7.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 495 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 319 RS R R + P P ++ VR R+ H+ P +S +P T LP+P K Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229 Query: 318 CKDPSHQ 298 K+PS Q Sbjct: 230 VKEPSVQ 236 >AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 904 Score = 29.9 bits (64), Expect = 7.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 495 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 319 RS R R + P P ++ VR R+ H+ P +S +P T LP+P K Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229 Query: 318 CKDPSHQ 298 K+PS Q Sbjct: 230 VKEPSVQ 236 >AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive matrix 1 protein. Length = 913 Score = 29.9 bits (64), Expect = 7.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 495 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 319 RS R R + P P ++ VR R+ H+ P +S +P T LP+P K Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229 Query: 318 CKDPSHQ 298 K+PS Q Sbjct: 230 VKEPSVQ 236 >AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear matrix protein protein. Length = 820 Score = 29.9 bits (64), Expect = 7.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 495 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 319 RS R R + P P ++ VR R+ H+ P +S +P T LP+P K Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229 Query: 318 CKDPSHQ 298 K+PS Q Sbjct: 230 VKEPSVQ 236 >AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear matrix protein protein. Length = 820 Score = 29.9 bits (64), Expect = 7.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 495 RSIRSRSLQLPCPTKQPILVRISRE-PHTP*PAVTVRSNIRAPLHRFPCCTGMLPDPHQK 319 RS R R + P P ++ VR R+ H+ P +S +P T LP+P K Sbjct: 170 RSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVK 229 Query: 318 CKDPSHQ 298 K+PS Q Sbjct: 230 VKEPSVQ 236 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 96,683,491 Number of Sequences: 237096 Number of extensions: 2203433 Number of successful extensions: 12004 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 11743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11998 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 6155099854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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