Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h04r
         (811 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001890-1|AAN71679.1|  566|Drosophila melanogaster SD16013p pro...    29   7.5  
AY752878-1|AAV33343.1|  593|Drosophila melanogaster TAF6-like pr...    29   7.5  
AE014297-268|AAF52013.3|  589|Drosophila melanogaster CG10390-PA...    29   7.5  
AF247768-1|AAF86228.1|  809|Drosophila melanogaster Toll-4 protein.    29   9.9  
AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-P...    29   9.9  

>BT001890-1|AAN71679.1|  566|Drosophila melanogaster SD16013p
           protein.
          Length = 566

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 436 IKIQTKNSCDLKKSHKRKSVFNEGKEF*AELTLGKIAKNMVIP 564
           +KI T N C+    H++K +F++  +F     +    KN +IP
Sbjct: 509 VKISTPNLCNTMLQHQKKDLFSKPSDFVVPQLVVNQFKNGLIP 551


>AY752878-1|AAV33343.1|  593|Drosophila melanogaster TAF6-like
           protein protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 436 IKIQTKNSCDLKKSHKRKSVFNEGKEF*AELTLGKIAKNMVIP 564
           +KI T N C+    H++K +F++  +F     +    KN +IP
Sbjct: 509 VKISTPNLCNTMLQHQKKDLFSKPSDFVVPQLVVNQFKNGLIP 551


>AE014297-268|AAF52013.3|  589|Drosophila melanogaster CG10390-PA
           protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 436 IKIQTKNSCDLKKSHKRKSVFNEGKEF*AELTLGKIAKNMVIP 564
           +KI T N C+    H++K +F++  +F     +    KN +IP
Sbjct: 505 VKISTPNLCNTMLQHQKKDLFSKPSDFVVPQLVVNQFKNGLIP 547


>AF247768-1|AAF86228.1|  809|Drosophila melanogaster Toll-4 protein.
          Length = 809

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 577 LWSLQSGSTNKTKTYVNL--NTVVTIQFDSPQCFKYLFSLNVFRVRLSRWS 723
           L SL      ++  Y+++  N + T+   SPQ  +YL+S+NVF    ++WS
Sbjct: 127 LTSLSVSQLPESLHYLDIRHNKITTL---SPQVVEYLYSVNVFNQYGNKWS 174


>AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-PA
           protein.
          Length = 1125

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 577 LWSLQSGSTNKTKTYVNL--NTVVTIQFDSPQCFKYLFSLNVFRVRLSRWS 723
           L SL      ++  Y+++  N + T+   SPQ  +YL+S+NVF    ++WS
Sbjct: 443 LTSLSVSQLPESLHYLDIRHNKITTL---SPQVVEYLYSVNVFNQYGNKWS 490


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,734,463
Number of Sequences: 53049
Number of extensions: 580312
Number of successful extensions: 1088
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)