Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h03r
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.7  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 780 IDSSKLCIPIFRGSLQIYQLQRDN 709
           ++SSK+ + + R +  +Y+L  DN
Sbjct: 143 LESSKISVGLIRDTAVLYRLLADN 166


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 76  DDIFVALIVTHYIYSLYTSTVYFIY 2
           D + +  +V  + Y +Y  TVY+IY
Sbjct: 136 DYVSLLQLVFVFCYFIYLFTVYYIY 160


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
          castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 94 ILVLCLDDIFVALIVTHY 41
          ILVLCL  + + L V H+
Sbjct: 5  ILVLCLATLALGLFVPHF 22


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 158 LDNVQTHLDPYDIDQDY*VLLSSLKYTAVLFKSVILVEQSPDR 286
           LDN Q  L P D++     +L +   +    +++ L+++S  R
Sbjct: 483 LDNQQLELKPIDLNSGDLSMLETNNLSETFTQNLSLMDESEGR 525


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 230 SMNSRVPNSLDRYHT 186
           S+N R P+ L+ +HT
Sbjct: 248 SLNFRTPSCLETFHT 262


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 526 FGLKFFAFVKDRFAFMGLFKIARIFCLDFYL 434
           FG+ F+ F+   F F     I   +   FY+
Sbjct: 235 FGVSFYFFISTFFYFFTTGNIIATYDKQFYI 265


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 526 FGLKFFAFVKDRFAFMGLFKIARIFCLDFYL 434
           FG+ F+ F+   F F     I   +   FY+
Sbjct: 231 FGVSFYFFISTFFYFFTTGNIIATYDKQFYI 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,904
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)