Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g24r
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.5  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +3

Query: 510  TTPCSTMRPAANCTTRRDPTLVTPMAPTFSPKVLVPFPE 626
            T   +T RP    TT R  T   P   T  P   V  PE
Sbjct: 1057 TRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPE 1095


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -3

Query: 479 PAARSRRPLLRYVRNDIGLRSLSTSVRGPEQLEEPVHHRVQPVLPAGPDP 330
           P+    RP+L Y +N I     S S+    QL    HH+  P+ P    P
Sbjct: 27  PSLSDTRPMLPYPQNYINSYLFSLSLAQNNQLF--THHKA-PIRPVALPP 73


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 434 HSEHNAEEAADYGLRDDDEHGSQLAHDPLQHH 529
           H E +A     + L    +H + L H+P+ HH
Sbjct: 324 HEELSAMVNRCHPLSLSSDHQAMLHHNPMSHH 355


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 167 PGRQPSLFISTRDHVVQQTADGAPHEYGGG 256
           P R P+  +   D VV +T   +P   GGG
Sbjct: 6   PLRMPTGHLDDDDFVVVKTRSNSPEAGGGG 35


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 167 PGRQPSLFISTRDHVVQQTADGAPHEYGGG 256
           P R P+  +   D VV +T   +P   GGG
Sbjct: 6   PLRMPTGHLDDDDFVVVKTRSNSPEAGGGG 35


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 714 VRCSTPFPCTPSTAGWAPR 658
           + CSTPF      A W P+
Sbjct: 274 IACSTPFILAQLWATWDPQ 292


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 720 SNVRCSTPFPCTPST 676
           SNV  STP P T ST
Sbjct: 153 SNVISSTPLPPTTST 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,065
Number of Sequences: 336
Number of extensions: 3395
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)