Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g24f
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.48 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.48 
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    25   0.64 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    24   1.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 275  VPLYIHGFTALPDDDWGHCRDPVHPLPGSLHGGNRSRPIQYYIYYDICHRFNN 433
            VP Y   FT       G+  D   P  G    G  ++      YY+IC+R  N
Sbjct: 867  VPFYGQSFTLTK----GNNHDQGVPSAGPGEAGEYTKQPGMLAYYEICNRIRN 915



 Score = 25.0 bits (52), Expect = 0.48
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 353  PGSLHGGNRSRPIQYYIYYDICH 421
            PG    G  +R   +  YY+ICH
Sbjct: 1662 PGPGQAGEYTRAAGFLAYYEICH 1684



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 251  WDRRHAALVPLYIH 292
            WD++   + PLY H
Sbjct: 1596 WDKQTGHVAPLYYH 1609


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 150 SLLLCKYICVYSYPFNLNITIVSHMFEISFN 58
           S L   Y C+  Y FN N TI   +F + FN
Sbjct: 238 SSLSSLYTCIAGYEFNANFTISYILFAL-FN 267


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 161 VNFTHYYYANTYA 123
           ++F +YYYA TYA
Sbjct: 60  IDFNYYYYAATYA 72


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -3

Query: 168 IDSQFYSLLLCKYICVYSYPFNLNITIVSHMFEISFNVKLC 46
           I SQF  +    Y C++ Y ++  + +  +  +I F   LC
Sbjct: 246 IASQFVGIFCSLYFCIFGYIYDDEMVVPQNFHDI-FLPLLC 285


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -3

Query: 168 IDSQFYSLLLCKYICVYSYPFNLNITIVSHMFEISFNVKLC 46
           I SQF  +    Y C++ Y ++  + +  +  +I F   LC
Sbjct: 71  IASQFVGIFCSLYFCIFGYIYDDEMVVPQNFHDI-FLPLLC 110


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 7/54 (12%)
 Frame = +3

Query: 453 GCRLPIVQGGTISFLVPTLAILNL-------PAWKCPEEEILVAMSTEERRQVW 593
           G   P+       + VPTL  L         P W+  E E L  +     R+ W
Sbjct: 191 GAHTPLTDDHDEKYGVPTLEELGFDTEGRLPPVWQGGESEALARLERHLERKAW 244


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 341 VHPLPGS--LHGGNRSRPIQYYIYYDICHRFN 430
           V+P  G+  +   NR   I YY++  I  RFN
Sbjct: 213 VYPFEGAREIVDKNRRGEIFYYMHQQIIARFN 244


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 174 NHIDSQFYSLLLCKYICVYSYPFNLNITIVSHMFEIS 64
           NH  S+ +    C Y CV     N ++   S+++  S
Sbjct: 252 NHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYS 288


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 174 NHIDSQFYSLLLCKYICVYSYPFNLNITIVSHMFEIS 64
           NH  S+ +    C Y CV     N ++   S+++  S
Sbjct: 10  NHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYS 46


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 256 STTRRPGTSVYSWLY 300
           S T R GTS  +WLY
Sbjct: 413 SDTNRFGTSGLAWLY 427


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 64   ADFKHM*YYCYIQIERIRIHAYVF 135
            AD  ++ + CY  I+ +R   Y F
Sbjct: 1007 ADVFYICHVCYATIQEVRAKIYFF 1030


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 64  ADFKHM*YYCYIQIERIRIHAYVF 135
           AD  ++ + CY  I+ +R   Y F
Sbjct: 288 ADVFYICHVCYATIQEVRAKIYFF 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,348
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)