Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g24f
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0782 + 31969677-31969767,31969863-31969960,31970059-319702... 88 4e-18
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 84 9e-17
09_02_0423 + 9153088-9153181,9153281-9153378,9153532-9153708,915... 83 2e-16
09_03_0154 + 12831120-12831222,12831761-12831858,12832019-128321... 81 7e-16
08_02_0439 + 17184384-17184474,17184614-17184711,17185134-171853... 81 7e-16
08_02_0695 + 20122838-20122949,20123238-20123335,20123520-201236... 77 8e-15
03_06_0502 - 34384285-34384503,34384595-34384755,34384854-343849... 77 8e-15
03_05_0773 + 27612237-27612330,27612426-27612523,27612605-276127... 74 1e-13
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 72 4e-13
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823... 66 3e-11
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656... 47 1e-05
01_06_0807 + 32125987-32126029,32126030-32126208,32126760-321269... 31 0.52
02_05_1247 + 35233756-35233785,35234902-35236107 31 0.69
07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839,130... 30 1.2
11_04_0370 + 16891334-16891469,16891556-16891707,16893277-168936... 29 2.1
12_01_0590 - 4813764-4814401,4814785-4814872,4815176-4815376,481... 29 2.8
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 28 4.9
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 27 8.5
03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196... 27 8.5
02_05_0789 + 31766300-31767056,31767316-31767659 27 8.5
02_05_0713 + 31159574-31160764 27 8.5
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 27 8.5
>01_06_0782 +
31969677-31969767,31969863-31969960,31970059-31970235,
31970367-31970467,31970626-31970701,31970827-31970886,
31970979-31971215,31971612-31971686,31971981-31972039,
31972110-31972201,31972463-31972623,31972964-31973176
Length = 479
Score = 88.2 bits (209), Expect = 4e-18
Identities = 44/100 (44%), Positives = 61/100 (61%)
Frame = +3
Query: 219 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 398
P E +G Y ID PPW I + QHY+ +G V IP +L P M +D DR +
Sbjct: 13 PMEQLQG-FEYCIDSNPPWGEAIILGFQHYILALGTAVMIPAVLVPM--MGGSDGDRVRV 69
Query: 399 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAIL 518
+ T++FVTG+ T LQ+ FG RLP V GG+ +F+VP +AI+
Sbjct: 70 VQTLLFVTGINTLLQSLFGTRLPTVIGGSYAFVVPIMAII 109
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 83.8 bits (198), Expect = 9e-17
Identities = 42/107 (39%), Positives = 61/107 (57%)
Frame = +3
Query: 201 VRGEQKPEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETD 380
V E P G + G+ + P W IF +QHYL++ G++V +P IL P M +D
Sbjct: 261 VTSETAPLYGESG-LRCGVTENPGWVPLIFYGIQHYLSIAGSLVFVPLILVPT--MGGSD 317
Query: 381 PDRSNIISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILN 521
D + +IST++ V+GL T L FG RLP++QG + +L P L I N
Sbjct: 318 EDTATVISTILLVSGLTTILHTFFGSRLPLIQGSSFVYLAPALVISN 364
>09_02_0423 +
9153088-9153181,9153281-9153378,9153532-9153708,
9153827-9153927,9154334-9154490
Length = 208
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/94 (41%), Positives = 57/94 (60%)
Frame = +3
Query: 249 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGL 428
Y ID P W I + QHY+ +G V IP +L P M D D++ ++ T++FVTG+
Sbjct: 23 YCIDSNPSWGEAIALGFQHYILSLGTAVMIPTMLVPL--MGGNDHDKARVVQTLLFVTGI 80
Query: 429 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLPA 530
T LQ FG RLP + GG+ +F+VP L+I+ P+
Sbjct: 81 KTLLQTLFGTRLPTIIGGSYAFVVPILSIIRDPS 114
>09_03_0154 +
12831120-12831222,12831761-12831858,12832019-12832195,
12832307-12832407,12832503-12832578,12832665-12832724,
12832810-12832994,12833078-12833174,12833279-12833365,
12833453-12833511,12833617-12833708,12833821-12833898,
12834000-12834160,12834267-12834485
Length = 530
Score = 81.0 bits (191), Expect = 7e-16
Identities = 36/100 (36%), Positives = 60/100 (60%)
Frame = +3
Query: 219 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 398
P + + +V++ I PPW I + QH++ M+G V IP L P M + +++ +
Sbjct: 16 PPKEQLASVSFCITSPPPWPEAIILGFQHFIVMLGTTVIIPSALVPQ--MGGGNDEKARV 73
Query: 399 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAIL 518
I T++FV G+ T Q FG RLP+V GG+ +F+ PT++I+
Sbjct: 74 IQTLLFVAGINTLFQTFFGSRLPVVMGGSYTFVAPTISII 113
>08_02_0439 +
17184384-17184474,17184614-17184711,17185134-17185310,
17185450-17185550,17186028-17186103,17186438-17186682,
17186784-17186880,17186990-17187076,17187268-17187362,
17187462-17187553,17187630-17187707,17187832-17187992,
17188095-17188307
Length = 536
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/94 (39%), Positives = 56/94 (59%)
Frame = +3
Query: 249 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGL 428
Y ID P W I + QHY+ +G V IP +L P M D++ ++ TM+FVTG+
Sbjct: 22 YCIDSNPSWGEAIALGFQHYILCLGTAVMIPTLLVPL--MGGNAHDKAKVVQTMLFVTGI 79
Query: 429 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLPA 530
T LQ FG RLP + GG+ +F++P ++I+ P+
Sbjct: 80 NTMLQTLFGTRLPTIIGGSYAFVIPVISIIKDPS 113
>08_02_0695 +
20122838-20122949,20123238-20123335,20123520-20123696,
20123790-20123890,20124049-20124124,20124213-20124272,
20124362-20124546,20124638-20124734,20124817-20124903,
20124989-20125047,20125157-20125248,20125436-20125513,
20125617-20125777,20125880-20126098
Length = 533
Score = 77.4 bits (182), Expect = 8e-15
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +3
Query: 240 NVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFV 419
+V+Y I PPW + + QHY+ M+G V IP L P M + +++ +I T++FV
Sbjct: 26 SVSYCITSPPPWPEAVILGFQHYIVMLGTSVIIPSALVPQ--MGGGNEEKARVIQTLLFV 83
Query: 420 TGLITWLQATFGCRLPIVQGGTISFLVPTLAIL 518
G+ T Q+ FG RLP V GG+ + + PT++I+
Sbjct: 84 AGINTLCQSFFGTRLPAVMGGSYTIVAPTISII 116
>03_06_0502 -
34384285-34384503,34384595-34384755,34384854-34384931,
34385444-34385595,34385645-34385703,34385808-34385894,
34385990-34386086,34386232-34386416,34386494-34386553,
34386640-34386715,34386824-34386924,34387039-34387215,
34387302-34387399,34387505-34387604
Length = 549
Score = 77.4 bits (182), Expect = 8e-15
Identities = 35/92 (38%), Positives = 56/92 (60%)
Frame = +3
Query: 243 VTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVT 422
++Y + PPW I + QHYL M+G V IP L P M + +++ +I T++FV
Sbjct: 23 ISYCLTSPPPWPEAILLGFQHYLVMLGTTVIIPTALVPQ--MGGGNEEKARVIQTLLFVA 80
Query: 423 GLITWLQATFGCRLPIVQGGTISFLVPTLAIL 518
G+ T +Q+ G RLP V GG+ +F+ PT++I+
Sbjct: 81 GINTLIQSFLGTRLPAVIGGSYTFVAPTISII 112
>03_05_0773 +
27612237-27612330,27612426-27612523,27612605-27612781,
27612869-27612969,27613079-27613154,27613255-27613314,
27613412-27613596,27613669-27613807,27614229-27614315,
27614939-27615127,27615243-27615461
Length = 474
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/103 (35%), Positives = 57/103 (55%)
Frame = +3
Query: 219 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 398
P+E G V Y I PPW + +A QHYL M+G V + IL P M +++ +
Sbjct: 14 PKEQYDG-VDYCITSPPPWLTAVLLAFQHYLVMLGTTVIVATILVP--LMGGGHVEKAIV 70
Query: 399 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLP 527
+ T++F+ G+ T LQ G RLP V G + +++ P +AI+ P
Sbjct: 71 VQTILFLAGINTLLQVHLGTRLPAVMGASYAYIYPAVAIILSP 113
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/93 (36%), Positives = 56/93 (60%)
Frame = +3
Query: 249 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGL 428
Y + D+P + QHY++M+G+I+ IP ++ PA M + D + ++ST++ V+G+
Sbjct: 143 YELRDSPGVFPIAVYGFQHYISMLGSIILIPLLMVPA--MGGSPDDMAAVVSTVLLVSGM 200
Query: 429 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLP 527
T L G RLP+VQG + +L P LAI+ P
Sbjct: 201 TTLLHTFCGTRLPLVQGPSFVYLAPALAIIYSP 233
>12_02_0917 +
24281029-24281137,24281998-24282095,24282196-24282372,
24282490-24282590,24282684-24282759,24282843-24282902,
24282999-24283195,24283296-24283392,24283478-24283564,
24283925-24283983,24284535-24284626,24284706-24284783,
24284891-24285051,24285303-24285530
Length = 539
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/99 (32%), Positives = 53/99 (53%)
Frame = +3
Query: 219 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 398
P + ++ Y + P W +A HYL M+G+ V + + PA M T D++ +
Sbjct: 18 PPHEQFHHLAYCVHSNPSWVQVAALAFLHYLVMLGSTVMLASTIVPA--MGGTPGDKARV 75
Query: 399 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAI 515
I + +F++G+ T LQ G RLP V + +F+VP L+I
Sbjct: 76 IQSFLFMSGINTLLQTLVGTRLPTVMNASFAFVVPVLSI 114
>02_05_0704 -
31064996-31065214,31065306-31065466,31065583-31065660,
31066560-31066651,31066775-31066833,31066924-31067010,
31067118-31067214,31067311-31067495,31067593-31067665,
31067725-31067805,31067948-31068048,31068133-31068246,
31068391-31068488,31069789-31069915
Length = 523
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/100 (33%), Positives = 46/100 (46%)
Frame = +3
Query: 219 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 398
P + + V+Y I PPW I + QHYL M+G V IP L P + N
Sbjct: 24 PVKDQLPGVSYCITSPPPWPEAILLGFQHYLVMLGTTVIIPTALVPQM--------GGN- 74
Query: 399 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAIL 518
+ FG RLP V GG+ +F+VPT++I+
Sbjct: 75 --------------NSFFGTRLPAVIGGSYTFVVPTISII 100
>01_06_0807 +
32125987-32126029,32126030-32126208,32126760-32126943,
32127714-32127788,32128079-32128188,32128747-32128965,
32129124-32129279,32129759-32129911,32130223-32130349,
32131598-32131728,32131858-32132139
Length = 552
Score = 31.5 bits (68), Expect = 0.52
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 338 PVHPLPGSLHGGNRSRPIQYYIYYDICHRFNNLASGDLRLSTAYSSRRHHIISGADARDT 517
P+ PLP S G RP+Q + Y+I HR +N G++ TA + R I GAD +T
Sbjct: 32 PLFPLP-SKSNGIEKRPLQTFRPYNIAHRGSN---GEIPEETAAAYLR-AIEEGADFIET 86
Query: 518 E 520
+
Sbjct: 87 D 87
>02_05_1247 + 35233756-35233785,35234902-35236107
Length = 411
Score = 31.1 bits (67), Expect = 0.69
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 389 IQYYIYY-DICHRFNNLASGDLRLSTAYSSRRHHIISGADARDTEPAGLEVSRGGDLGRH 565
+ YYI+ C +N+ +S D R + S RR S + EP GLE + L
Sbjct: 158 LTYYIFVIRCCLNWNSSSSSDTRTAGLISRRRRGAASSSLPAVAEPRGLEEAAIQSLPAF 217
Query: 566 EYRR 577
YR+
Sbjct: 218 RYRK 221
>07_01_0184 -
1304328-1304951,1305328-1305441,1305549-1305839,
1305930-1306238,1306326-1307048
Length = 686
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 261 DTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEET 377
+ P W +C AL +L ++ A + PFI+ P L E T
Sbjct: 522 ELPDWVVCYIPALMSFLNILPAPKSFPFII-PYLLFENT 559
>11_04_0370 +
16891334-16891469,16891556-16891707,16893277-16893639,
16893832-16893929,16893983-16896029
Length = 931
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 17 CDCRNIIKLPQSLTLKLIS 73
CDC+N++ P S TL+++S
Sbjct: 780 CDCKNLVTFPASATLQILS 798
>12_01_0590 -
4813764-4814401,4814785-4814872,4815176-4815376,
4816803-4816830,4817136-4817339,4817352-4819136,
4820358-4821139
Length = 1241
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 438 LQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPEEEIL 557
L+ T LP+ G TI +P+L L+L CPEE ++
Sbjct: 772 LKLTIRKALPMDDGVTILACLPSLVHLDLRLLVCPEERVI 811
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 192 VNDVRGEQKPEEARKGNVTYGIDDTPPW 275
V D+RGE +P+E+ N G TP W
Sbjct: 534 VRDIRGEAEPQESAGSNSFAGNAWTPSW 561
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -1
Query: 368 HAESRAEDERDRDNGPNHRQVML*SHEYTEVPGRRVVDPIRDIAFACLLWFLFT 207
H ES + DE DN + S P R ++D AFA LLW+L +
Sbjct: 786 HRESVSSDEPS-DNSKRRKLHSCKSSMSPSPPKSRNRQCLKDTAFAYLLWYLLS 838
>03_06_0109 -
31717691-31718311,31719110-31719223,31719316-31719606,
31719698-31720006,31720098-31720865
Length = 700
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 261 DTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEET 377
+ P W +C AL L ++ + + PFI+ P L E T
Sbjct: 537 ELPDWVVCYIPALMSLLNILPSPKSFPFII-PYLLFENT 574
>02_05_0789 + 31766300-31767056,31767316-31767659
Length = 366
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 251 WDRRHAALVPLYIHGFTALPDDDW 322
W+++ L L++H F A PD DW
Sbjct: 325 WEQQEEILA-LWLHHFAACPDTDW 347
>02_05_0713 + 31159574-31160764
Length = 396
Score = 27.5 bits (58), Expect = 8.5
Identities = 22/91 (24%), Positives = 32/91 (35%)
Frame = +2
Query: 290 HGFTALPDDDWGHCRDPVHPLPGSLHGGNRSRPIQYYIYYDICHRFNNLASGDLRLSTAY 469
HG A+ D + P P P + GGN R ++ + SG L L
Sbjct: 23 HGIHAVVRDSSAYTTRPPPPPPTADGGGNGGRISPAVLFIIVILAVIFFISGLLHLLVRL 82
Query: 470 SSRRHHIISGADARDTEPAGLEVSRGGDLGR 562
++ H GA+ P V R + R
Sbjct: 83 LMKKQHRRGGAENAAPSPHSRHVGRDAAMDR 113
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -1
Query: 542 GTLPGRQVQYRERRHQK*YGAALNYRQSTAEGRLKPGY*TCDKYHSRYNIGS 387
G+ PG QY ++Q+ YGA Y + A PGY Y Y GS
Sbjct: 654 GSAPGGYGQYGYSQNQQGYGAPPPYPGAPAASH--PGYGQQQSYGDPYGSGS 703
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,562,114
Number of Sequences: 37544
Number of extensions: 358820
Number of successful extensions: 898
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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