Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g23f
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p pro...    29   6.8  
AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-P...    29   6.8  
BT012304-1|AAS77429.1|  243|Drosophila melanogaster LP23088p pro...    28   8.9  
AE014298-1511|AAF47963.1|  243|Drosophila melanogaster CG17333-P...    28   8.9  
AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA...    28   8.9  

>AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p
           protein.
          Length = 724

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 51  AIVILCLFVASLYAADSDVPNDILEEQLY 137
           A++  CLF    YAAD+++P  I+EE  Y
Sbjct: 553 ALLFSCLFAVYGYAADAEIP-PIVEEAFY 580


>AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-PA
           protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 51  AIVILCLFVASLYAADSDVPNDILEEQLY 137
           A++  CLF    YAAD+++P  I+EE  Y
Sbjct: 542 ALLFSCLFAVYGYAADAEIP-PIVEEAFY 569


>BT012304-1|AAS77429.1|  243|Drosophila melanogaster LP23088p
           protein.
          Length = 243

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +2

Query: 176 KEQAFIRGEEERSHHKCREQTDTKQQDELHGVRLSTLAPGLQGHRPGLFPS*VQTYLRRK 355
           +E  F+R +  +    C    + K + ++    L  L  G  GH   LFP    T    K
Sbjct: 102 QESQFVRADTSQPLDACAADYEAKVKSQVDRFDLLLLGMGPDGHTCSLFPEQPATLQETK 161

Query: 356 R 358
           R
Sbjct: 162 R 162


>AE014298-1511|AAF47963.1|  243|Drosophila melanogaster CG17333-PA
           protein.
          Length = 243

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +2

Query: 176 KEQAFIRGEEERSHHKCREQTDTKQQDELHGVRLSTLAPGLQGHRPGLFPS*VQTYLRRK 355
           +E  F+R +  +    C    + K + ++    L  L  G  GH   LFP    T    K
Sbjct: 102 QESQFVRADTSQPLDACAADYEAKVKSQVDRFDLLLLGMGPDGHTCSLFPEQPATLQETK 161

Query: 356 R 358
           R
Sbjct: 162 R 162


>AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA
           protein.
          Length = 1316

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 23/76 (30%), Positives = 34/76 (44%)
 Frame = +1

Query: 130 SFTIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTS 309
           S + ++++P TT     A   TRR   +    S T    TT   A + P+N G+   + +
Sbjct: 468 SSSTSTTTPTTTTTTTTAEPTTRRSTTRPPTKSTTTISATTASPASNPPVN-GTGTVQAT 526

Query: 310 SGIVSQLSSDLSSPKT 357
           S   S  SS  SS  T
Sbjct: 527 SITTSSSSSSSSSTST 542


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,219,648
Number of Sequences: 53049
Number of extensions: 471237
Number of successful extensions: 1935
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)