Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g22r
(566 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 217 2e-55
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 187 1e-46
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 160 2e-38
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 154 2e-36
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 142 5e-33
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 142 5e-33
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 138 1e-31
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 137 1e-31
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 132 4e-30
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 127 2e-28
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 127 2e-28
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 126 4e-28
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 98 1e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 95 1e-18
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 1e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 72 8e-12
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 72 8e-12
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 68 2e-10
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 4e-06
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 48 2e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 43 0.006
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.071
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.094
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 38 0.22
UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.38
UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062; ... 36 0.87
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 1.2
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 2.0
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 34 2.7
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 2.7
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 3.5
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 3.5
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 4.7
UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein prec... 33 4.7
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 4.7
UniRef50_UPI000023CCCF Cluster: hypothetical protein FG07400.1; ... 33 6.2
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 6.2
UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4; Muri... 33 6.2
UniRef50_Q07GA2 Cluster: Novel protein similar to H1 histone fam... 32 8.1
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 8.1
UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2; ... 32 8.1
UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1... 32 8.1
UniRef50_Q5ATD3 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 217 bits (529), Expect = 2e-55
Identities = 109/181 (60%), Positives = 129/181 (71%), Gaps = 2/181 (1%)
Frame = -2
Query: 541 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 362
MG+DI H DRKVRR E KSQDI RTN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 361 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 182
+S+SR+ R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 181 LTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPS 8
LTFDQLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG E+AR
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGR 180
Query: 7 R 5
R
Sbjct: 181 R 181
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 187 bits (456), Expect = 1e-46
Identities = 96/173 (55%), Positives = 123/173 (71%), Gaps = 2/173 (1%)
Frame = -2
Query: 514 DRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPPISVSRLARH 335
++K +RT KS DI RT++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 334 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 155
M+ +EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 154 APTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRR 2
P TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG EKAR R+
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRK 177
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 160 bits (389), Expect = 2e-38
Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Frame = -2
Query: 541 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRP 365
MGID K H R RT KS ++ RT+A FN++VL+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 364 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 185
P+SVSR+AR +K+ VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 184 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAP---GAPR--SHTKPYVRTKGHEK 20
+T DQLA+RAP G+ T++++G RN+REAVRHFG P APR S + + R +G +
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRR 180
Query: 19 AR 14
++
Sbjct: 181 SK 182
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 154 bits (373), Expect = 2e-36
Identities = 85/190 (44%), Positives = 117/190 (61%), Gaps = 3/190 (1%)
Frame = -2
Query: 562 FFLLVVKMGIDI-NHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLF 386
F +++ MGID+ N +K R + S++ RT+ FN+I+ +RL
Sbjct: 50 FSSILINMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLI 109
Query: 385 MSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARAR 206
M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M V AL TE AR R
Sbjct: 110 MPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKR 167
Query: 205 ILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH 26
I+ AGGE LTFDQLALR PTGK +L++G AR A +HFG APG P+S +PYVR+KG
Sbjct: 168 IVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGRPKSKARPYVRSKGR 227
Query: 25 --EKARPSRR 2
EKAR R+
Sbjct: 228 KFEKARGRRK 237
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 142 bits (344), Expect = 5e-33
Identities = 76/143 (53%), Positives = 101/143 (70%), Gaps = 2/143 (1%)
Frame = -2
Query: 427 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 248
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 247 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 68
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF---RNE 154
Query: 67 PRSHTKPYVRTKGH--EKARPSR 5
+ + KPYVR+KG EKAR R
Sbjct: 155 VKGNPKPYVRSKGRKFEKARGRR 177
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 142 bits (344), Expect = 5e-33
Identities = 76/147 (51%), Positives = 101/147 (68%), Gaps = 6/147 (4%)
Frame = -2
Query: 427 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 266
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 265 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 86
+IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
Query: 85 GPAPGAPRSHTKPYVRTKGHEKARPSR 5
G A G P SH+KPY +G E R R
Sbjct: 160 G-ASGVPGSHSKPYATNRGKETKRGRR 185
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 138 bits (333), Expect = 1e-31
Identities = 81/173 (46%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Frame = -2
Query: 553 LVVKMGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMS 380
L ++ G+D K R V R +V S ++ RT+++FN VLRRL +
Sbjct: 212 LSIQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSQFNATVLRRLQST 270
Query: 379 RINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARIL 200
R R PISVSRL + + + VVVGTVT+D RL +PK+ V AL TE AR RIL
Sbjct: 271 RTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKLNVCALRFTETARKRIL 330
Query: 199 AAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYV 41
AAGG+ LTFDQLA + PTG T+L++G + REA++HFG A G P SH KPYV
Sbjct: 331 AAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGLPGSHAKPYV 382
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 137 bits (332), Expect = 1e-31
Identities = 65/112 (58%), Positives = 88/112 (78%)
Frame = -2
Query: 427 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 248
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 247 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 92
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 132 bits (320), Expect = 4e-30
Identities = 78/177 (44%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Frame = -2
Query: 541 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRP 365
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 364 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 185
+SVSRLA M K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG
Sbjct: 61 VLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGR 118
Query: 184 ILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKAR 14
++FD+L PTG VL+QG+R+ R + FG +PG P SH KP KG AR
Sbjct: 119 CMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGAR 174
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 127 bits (307), Expect = 2e-28
Identities = 62/117 (52%), Positives = 81/117 (69%)
Frame = -2
Query: 373 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 194
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 193 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 23
GG+ LTFDQLAL +P TVL+ G R RE HF A G P SHTKPYVR+KG +
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 127 bits (306), Expect = 2e-28
Identities = 71/153 (46%), Positives = 93/153 (60%)
Frame = -2
Query: 541 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 362
M ID++ H RK + + RT +KF + +L RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 361 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEI 182
+S S+LA MKK E AV V TVT D R Y +PKM V AL T+ A A I AGG+
Sbjct: 61 VSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKC 117
Query: 181 LTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 83
L FD+LAL+APTG+KTVL++G+RN REA++HFG
Sbjct: 118 LRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 126 bits (304), Expect = 4e-28
Identities = 70/129 (54%), Positives = 86/129 (66%)
Frame = -2
Query: 427 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 248
T++ FN VLRRL +R R PISVSRL + + + VVVGTVT+DVRL +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 247 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 68
V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R RE ++HFG A G
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGL 449
Query: 67 PRSHTKPYV 41
P SH KPYV
Sbjct: 450 PGSHAKPYV 458
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 98.3 bits (234), Expect = 1e-19
Identities = 49/113 (43%), Positives = 71/113 (62%)
Frame = -2
Query: 367 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 188
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 187 EILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 29
+IL+FDQLA+ +P +G + + RH G G+P S+ KPYV + G
Sbjct: 107 KILSFDQLAMTSP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 95.1 bits (226), Expect = 1e-18
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Frame = -2
Query: 280 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 101
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 100 AVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSR 5
AV+HF + + KPYVR+KG EKAR R
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRKFEKARGRR 215
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = -2
Query: 427 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 248
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 247 TVAALHVT 224
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/66 (53%), Positives = 45/66 (68%)
Frame = -2
Query: 541 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 362
+G+DI H DRKVRR E KSQDI RTN+ FN++VL+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 361 ISVSRL 344
+++SR+
Sbjct: 170 LALSRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 72.1 bits (169), Expect = 8e-12
Identities = 39/113 (34%), Positives = 66/113 (58%)
Frame = -2
Query: 541 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 362
+G+ ++ K +K + T KS DI +T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 361 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 203
+ +SRL R M ++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 72.1 bits (169), Expect = 8e-12
Identities = 39/113 (34%), Positives = 66/113 (58%)
Frame = -2
Query: 541 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPP 362
+G+ ++ K +K + T KS DI +T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 361 ISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 203
+ +SRL R M ++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 67.7 bits (158), Expect = 2e-10
Identities = 44/162 (27%), Positives = 76/162 (46%)
Frame = -2
Query: 499 RTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT 320
R E +S++I ++ + + +RL MS+ +R P+ +S++ + +
Sbjct: 20 RKEPRSKNIYLRALSDFYTKVASNSSVLAIKKISKRLKMSKSDRQPVKISKIVSEIGESK 79
Query: 319 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 140
+ +AVVV V +D + IP + V AL ++ + +I GG I T DQL P
Sbjct: 80 DK--VAVVVAKVLDDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMD 137
Query: 139 KTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKAR 14
LV + +R + + +GPAPG S T P K H + +
Sbjct: 138 DICLVSTNKFSRRSAKFWGPAPGEKGSTTYPRANQKCHNREK 179
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/102 (27%), Positives = 57/102 (55%)
Frame = -2
Query: 418 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 239
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 238 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 113
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 48.0 bits (109), Expect = 2e-04
Identities = 37/144 (25%), Positives = 69/144 (47%)
Frame = +2
Query: 2 TTTGPCFFMSLGANIGFSVRARCSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSK 181
T+T F +S G +S+ + +V+ + S T +L S+ SQLI+S
Sbjct: 29 TSTSSSFELSTGRLDSWSLTL--VRTETEVSSSFSGSSWTSDDQGVLTLWSSNSQLIQSD 86
Query: 182 NFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHVARQTRHRD 361
F++S Q+ +SS+ L S VI + + +++LL +R + +R+
Sbjct: 87 GFTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLLQGSRDSGNRN 146
Query: 362 WWPVDTAHKEPA*NDLIEFGICTS 433
WW VD ++ ++L+E+ I T+
Sbjct: 147 WWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2
Query: 334 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 155
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 154 APTGKKTVLV 125
P G +V
Sbjct: 112 YPRGSGVRIV 121
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 39.1 bits (87), Expect = 0.071
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = -2
Query: 370 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 191
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 190 GEILTFDQLALRAPTGKKTVLV 125
G + F +L PTGK VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.094
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +3
Query: 186 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 365
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 366 GRLI 377
G LI
Sbjct: 63 GSLI 66
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 37.5 bits (83), Expect = 0.22
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -2
Query: 412 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 236
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 235 LHVTEKARARILAAGGEILTFDQLALRAPTG 143
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 740
Score = 36.7 bits (81), Expect = 0.38
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 163 ALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSRR 2
A RAP G L+ R AR + R P P PR+ T+P+ + +AR SRR
Sbjct: 668 ATRAPFGACAALIARARGARRSRRARAP-PRTPRTATRPHAARRRGRRARRSRR 720
>UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062;
n=2; Homo sapiens|Rep: CDNA FLJ46261 fis, clone
TESTI4025062 - Homo sapiens (Human)
Length = 280
Score = 35.5 bits (78), Expect = 0.87
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Frame = -1
Query: 305 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 141
CR SG S R CS +S T CW + F S+G+S +
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89
Query: 140 EDSTGTRSAKC----S*GSASLWPCSRSTALSH*TLCSHQGT 27
S+GT S C S S++ W C S S +C GT
Sbjct: 90 CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -2
Query: 346 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 233
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 34.3 bits (75), Expect = 2.0
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = -2
Query: 424 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 248
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 247 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 122
VAA + AR +I AAGGE LT +L P G +++
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 33.9 bits (74), Expect = 2.7
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 5 TTGPCFFMSLGANIGFSVRARCS-WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSK 181
T P +++ L FS+ A W K T +I+LT Q+CLL R+T +
Sbjct: 49 TYWPIWYIELVFATLFSLNAVFDFWKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTS 108
Query: 182 NFSSSSQ 202
NF+ SS+
Sbjct: 109 NFARSSK 115
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 2.7
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = -2
Query: 427 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 248
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 247 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 140
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 3.5
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 80 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 259
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 260 LVQ 268
L++
Sbjct: 257 LME 259
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 3.5
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = -2
Query: 424 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 245
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 244 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 122
VAA ++KA+ +I +AGGE ++ D + P G +++
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 4.7
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 183 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 73
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q2RY86 Cluster: Alpha-2-macroglobulin-like protein
precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Alpha-2-macroglobulin-like protein precursor -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 1759
Score = 33.1 bits (72), Expect = 4.7
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Frame = -2
Query: 376 INRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILA 197
+ P ++++ L R + P ++V + + ++ + + AL V E RA LA
Sbjct: 1141 VRDPMVAMATLPRFLA-PGDRSFLSVSLDNIDGPAGVWTLAAVGEGALSVPEGPRAVDLA 1199
Query: 196 AGGEILTFDQLALRA----PTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 29
GG L +LA+ P + + RE F PGAPR + G
Sbjct: 1200 KGGRDLV--RLAVEGLNPGPGTLRLAITAPTGERREKTWSFDVRPGAPRMTLAHRLDLGG 1257
Query: 28 HEKAR 14
H +AR
Sbjct: 1258 HGRAR 1262
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 33.1 bits (72), Expect = 4.7
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = -2
Query: 403 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 224
+ +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 223 EKARARILAAGGEILTFDQLALRAPTG 143
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
>UniRef50_UPI000023CCCF Cluster: hypothetical protein FG07400.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07400.1 - Gibberella zeae PH-1
Length = 333
Score = 32.7 bits (71), Expect = 6.2
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = -2
Query: 220 KARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG----PAPGAPRSHT 53
KA +R G L AP G K Q+N R+ ++ G P P PRS +
Sbjct: 48 KAASRSTNIPGLTLAQSGAPENAPRGPKNGQADSQQNVRKGIKRKGKRHPPEPRKPRSES 107
Query: 52 KPYVRTKG 29
P V +KG
Sbjct: 108 PPKVPSKG 115
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 6.2
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = -2
Query: 418 KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTRE------GLIAVVVGTVTNDVRLY 263
+F +++ L++S RP I SV LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA--GLGIV 1301
Query: 262 KIPKMTVAALH 230
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_P11378 Cluster: Nuclear transition protein 2; n=4;
Murinae|Rep: Nuclear transition protein 2 - Mus musculus
(Mouse)
Length = 117
Score = 32.7 bits (71), Expect = 6.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 82 PAPGAPRSHTKPYVRTKGHEKARPSRR 2
P+PG P H KP V ++ H ARPS R
Sbjct: 53 PSPGPPMKHPKPSVHSR-HSPARPSHR 78
>UniRef50_Q07GA2 Cluster: Novel protein similar to H1 histone
family, member X h1fx; n=2; Xenopus tropicalis|Rep:
Novel protein similar to H1 histone family, member X
h1fx - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 212
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 127 VQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSR 5
+QG++ A R AP APR HTK + KGH KA P +
Sbjct: 115 MQGRKKPSVAKRPVSKAPRAPRGHTKSH--AKGH-KASPKK 152
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 8.1
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 164 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 268
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1007
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 92 THCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYL 262
+HC + I LT Q CL S S L +F +SS F N + +R+ YL
Sbjct: 598 SHCCSKIPLTTLQECLEKSSSYGEALTDLNSFPNSSTIHLAFIFKNFLNVNRYKYYL 654
>UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: EGF-like domain
containing protein - Tetrahymena thermophila SB210
Length = 2328
Score = 32.3 bits (70), Expect = 8.1
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 419 QIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSHK*RETVQDTEDDGG 240
Q+Q D S + + Y P+TN C+S AP++ + C+ S T +D +
Sbjct: 702 QLQPDNSCACVNQVYDPSTNKCISC-APNQVYDPINKICQNCNPS---CSTCKDASNLNT 757
Query: 239 CSSCYRKSSCTHFGCWRR--NSYF*SAGSSC 153
C+SC + C SYF A C
Sbjct: 758 CTSCPTGKVLYNGNCQDSCPQSYFADANKVC 788
>UniRef50_Q5ATD3 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 575
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 177 LLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQEHRALTLNPMFAPRDMKKQ 16
+L S + LR ++ +K++ +RQC+ L + HR L LN A +M+K+
Sbjct: 203 ILCSATYSLRSSKGTSHWKLAGQALRQCINLGYHRNHRRLGLNVSPAQVEMQKR 256
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 8.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 341 RQTRHRDWWPVDTAHKEP 394
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,023,395
Number of Sequences: 1657284
Number of extensions: 12986298
Number of successful extensions: 38442
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 36969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38394
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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