Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g22r
(566 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_49884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 29 2.6
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_48685| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_24186| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 8.1
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 175 bits (427), Expect = 2e-44
Identities = 93/180 (51%), Positives = 116/180 (64%), Gaps = 5/180 (2%)
Frame = -2
Query: 538 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXRTNAKFNQIVLRRLFMSRINRPPI 359
GIDI KH +K R E SQ++ RTNAKFNQIV++RL MSR RPP+
Sbjct: 109 GIDIEKKHPKKNYRREPVSQNVYIRLLVKLYRFLSRRTNAKFNQIVMKRLCMSRTKRPPL 168
Query: 358 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 179
S++RL R MK + I VVVG++T+D R++++P + + AL +E ARARIL AGGEIL
Sbjct: 169 SLARLVRKMKASGHKDKICVVVGSITDDKRIFEVPALKICALRFSETARARILKAGGEIL 228
Query: 178 TFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTK-----PYVRTKGHEKAR 14
TFDQLALRAP G+ TVL+QG R AREA RH G APG P S T Y+ T G + R
Sbjct: 229 TFDQLALRAPLGQNTVLLQGPRKAREAERHMGLAPGVPHSDTNWCGDLDYIGTDGDAQCR 288
>SB_49884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 149 RSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 259
R+ +S L+ S+N ++QNA T+FF + K H + Y
Sbjct: 16 RANESTLLTSENNDIANQNADTAFFTSKKKRHNNNSY 52
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 225 VT*RAATVIFGILYSLTSFVTVPTTTAIKPSR 320
+T R T++FGIL L + TT IKP R
Sbjct: 616 ITLRPITILFGILALLLNLFVFVTTVGIKPLR 647
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = -2
Query: 352 SRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTF 173
SRL MK PT++G+ V V+ + +T A E+ RAR+L G +
Sbjct: 92 SRLYEEMKHPTQDGMFVAVNSEVSVTFVGKEKEDVTFAKCAWFER-RARMLKGFGFVTFR 150
Query: 172 DQLALRAPTGKKTVLVQGQ 116
D + + KK ++ G+
Sbjct: 151 DPATIESVLAKKPHILDGK 169
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 190 GEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRS 59
GE+++ D++ +A + Q N EA R F P PG P S
Sbjct: 614 GEMMSDDEMKPKARCKRSQSTPIHQENREEAHRPFTPQPGRPLS 657
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 246 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVLRLARRQYW 127
RWL ++ + L H WL ++L +SWL+ +R W
Sbjct: 19 RWLNYV--RWLYHVRWLYHVRWLYHVSWLYHVRWLYHVRW 56
>SB_48685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 156 VLRLARRQYWYKVSEMLVRQCVTLALLQEHRALTLNPMFAPR 31
V+R R+ W K +++V CV LA++ L + +F R
Sbjct: 34 VIRNVHREGWQKSRDLIVLNCVLLAVIMLCAMLLIAVIFCRR 75
>SB_24186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 156 VLRLARRQYWYKVSEMLVRQCVTLALLQEHRALTLNPMFAPR 31
V+R R+ W K +++V CV LA++ L + +F R
Sbjct: 34 VIRNVHREGWQKSRDLIVLNCVLLAVIMLCAMLLIAVIFCRR 75
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 202 LAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 83
LA G T PT +T+ + GQ R A+R FG
Sbjct: 856 LATSGNTSTTISDNTATPTSSRTMQIPGQTQGRVALREFG 895
>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 785
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 293 HYHGNQTLTSWLLHVARQTRHRDWW 367
HYH N+ L +L ++R WW
Sbjct: 342 HYHSNEVLKDYLEMLSRTGPRHGWW 366
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 71 SWSRAKVTHCLTSISLTLYQY 133
+W RAKV HC +S S+T+ QY
Sbjct: 2539 TWYRAKVLHCDSSFSITV-QY 2558
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,313,632
Number of Sequences: 59808
Number of extensions: 418100
Number of successful extensions: 1170
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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