Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g21r
         (741 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu...    34   3.2  
UniRef50_O97278 Cluster: Transporter, putative; n=2; Plasmodium|...    33   5.6  
UniRef50_A3DN72 Cluster: Type II secretion system protein E; n=1...    33   7.4  
UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;...    33   9.7  
UniRef50_Q8II19 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  
UniRef50_Q8I2Q1 Cluster: Putative uncharacterized protein PFI126...    33   9.7  

>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
           falciparum|Rep: Rps5 protein - Plasmodium falciparum
          Length = 239

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = -2

Query: 635 MYFLKTVLFQDIFVCI*RNAFNVRNYLYVETIIVNFLLFFVTYFYIVN 492
           +Y++  VLF+ IF+ I +  FN  NYLY    I N L+ ++  +YI+N
Sbjct: 16  LYYV-IVLFKSIFILILKRKFN--NYLYK---IYNILIIYLKLYYIIN 57


>UniRef50_O97278 Cluster: Transporter, putative; n=2;
           Plasmodium|Rep: Transporter, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 3133

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 650 LKSHKMYFLKT-VLFQDIFVCI*RNAFNVRNYLYVETIIVN-FLLFFVTYFYIVN 492
           LK +K Y+  + +LF  I +      F +  Y YV   ++N F+LFF+ YF+++N
Sbjct: 612 LKINKYYYYYSWLLFYFIILFFYNIIFTLVVYFYVYKCLMNYFILFFLIYFFLMN 666


>UniRef50_A3DN72 Cluster: Type II secretion system protein E; n=1;
           Staphylothermus marinus F1|Rep: Type II secretion system
           protein E - Staphylothermus marinus (strain ATCC 43588 /
           DSM 3639 / F1)
          Length = 516

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +3

Query: 174 LFIQKHN--NTILIKKTLSNLNGKK*LREIHCYRDLPIRVN 290
           L+I+  N  N I I++TLSN+N KK L +I  Y + PIRVN
Sbjct: 97  LYIENPNCKNNICIQETLSNINDKK-LHKI--YSEQPIRVN 134


>UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;
           n=1; Eimeria tenella|Rep: hypothetical protein,
           conserved - Eimeria tenella
          Length = 1486

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -3

Query: 256 ISLSYFFPLRLLKVFFISIVLLCFCINRFLFALCYLSRIFCSVAMFY 116
           +  S+ FPL  L +FF    L  FC   FLF   +    FCS   FY
Sbjct: 519 VLFSFCFPLIFLFIFF----LFSFCFVLFLFLFVFFFCPFCSFLFFY 561


>UniRef50_Q8II19 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1697

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +1

Query: 505 KYVTKKRRKFTMMVSTYR*FLTLKAFL*MHTKMS*NKTVLRKYIL*DFKMKYYYFFCFVL 684
           +Y++   R+  M+   +  F  +K    M+ K    K + RK+I  DF   +Y++   + 
Sbjct: 217 RYISIDNRQSKMVDDIFMFFFLMKLNFVMNMK----KDIQRKHIEKDFNFNFYFYILLLY 272

Query: 685 ISLFVYQNT-LIKLPNRNLI 741
             +++Y  T  IK+ ++ LI
Sbjct: 273 YYIYIYNTTRKIKIFDQGLI 292


>UniRef50_Q8I2Q1 Cluster: Putative uncharacterized protein PFI1265w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI1265w - Plasmodium falciparum
            (isolate 3D7)
          Length = 1754

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
 Frame = -2

Query: 695  NNEIKTKQKK**YFILKSHKMYFLKTVLFQDI------FVCI*RNAFNVRN--YLYV-ET 543
            NN  K K+KK  Y + +  K YFLK +LF+DI       +C     FN  +  +LY+ + 
Sbjct: 1211 NNIFKRKKKK--YTVEQEQKKYFLKKLLFEDIEYKDTEIICKYIRKFNWNDSFFLYILKK 1268

Query: 542  IIVNFLLFFVTY 507
             I  +L++   Y
Sbjct: 1269 YIFKYLMYMSIY 1280


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,605,988
Number of Sequences: 1657284
Number of extensions: 9420330
Number of successful extensions: 20205
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20185
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)