Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g19f
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    83   8e-15
UniRef50_Q0Q027 Cluster: Putative defense protein; n=1; Antherae...    48   3e-04
UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep: Cecro...    46   7e-04
UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    44   0.003
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    42   0.015
UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    38   0.18 
UniRef50_O94267 Cluster: FACT complex subunit spt16; n=3; Ascomy...    36   0.72 
UniRef50_A0NG98 Cluster: ENSANGP00000030067; n=2; Eumetazoa|Rep:...    36   0.96 
UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial ...    34   3.9  
UniRef50_Q38A12 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  

>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
           Obtectomera|Rep: Antibacterial peptide - Bombyx mori
           (Silk moth)
          Length = 66

 Score = 82.6 bits (195), Expect = 8e-15
 Identities = 41/57 (71%), Positives = 41/57 (71%)
 Frame = +3

Query: 45  MYFTKXXXXXXXXXXXXXXXXAWDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGLV 215
           MYFTK                AWDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGLV
Sbjct: 1   MYFTKIVFVAIICIMIVSCASAWDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGLV 57


>UniRef50_Q0Q027 Cluster: Putative defense protein; n=1; Antheraea
           mylitta|Rep: Putative defense protein - Antheraea
           mylitta (Tasar silkworm)
          Length = 144

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +3

Query: 126 ELEGVGQRVRDSIISAGPAIDVLQ 197
           ELEG+GQRVRDSII AGPAIDVLQ
Sbjct: 55  ELEGIGQRVRDSIIIAGPAIDVLQ 78


>UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep:
           Cecropin-D - Antheraea pernyi (Chinese oak silk moth)
          Length = 36

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +3

Query: 111 WDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGL 212
           W+ FKELE  GQRVRD+IISAGPA+  + +A  L
Sbjct: 1   WNPFKELERAGQRVRDAIISAGPAVATVAQATAL 34


>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 17/34 (50%), Positives = 25/34 (73%)
 Frame = +3

Query: 111 WDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGL 212
           W  FK++E +G+ +RD I+ AGPAI+VL  AK +
Sbjct: 28  WKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKAI 61


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 111 WDFFKELEGVGQRVRDSIISAGPAIDVLQKA 203
           W  FK++E VGQ +RD II AGPA+ V+ +A
Sbjct: 28  WKLFKKIEKVGQNIRDGIIKAGPAVAVVGQA 58


>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 45  MYFTKXXXXXXXXXXXXXXXXAWDFFKELEGVGQRVRDSIISAGPAIDVLQKA 203
           M FT+                 W+ FKE+E    R RD++ISAGPA+  +  A
Sbjct: 1   MNFTRIIFFLFVVVFATASGKPWNIFKEIERAVARTRDAVISAGPAVRTVAAA 53


>UniRef50_O94267 Cluster: FACT complex subunit spt16; n=3;
           Ascomycota|Rep: FACT complex subunit spt16 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 1019

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +1

Query: 139 WVREFAIRSSALAQQSTYSKRLKD*STVLNQRKTNKIR*SVVVEQSEIER*SFKKKYHRK 318
           ++R F  RSS  ++ S   K ++D      +R+T +   + V+EQ ++     K+  H  
Sbjct: 605 FIRSFTFRSSNNSRMSQVFKDIQDMKKAATKRETERKEFADVIEQDKLIEIKNKRPAHIN 664

Query: 319 DVIVRP 336
           DV VRP
Sbjct: 665 DVYVRP 670


>UniRef50_A0NG98 Cluster: ENSANGP00000030067; n=2; Eumetazoa|Rep:
           ENSANGP00000030067 - Anopheles gambiae str. PEST
          Length = 136

 Score = 35.9 bits (79), Expect = 0.96
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 440 LKIFMFICLRYYCRYFCCIFV-LAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCST 264
           L +++FICL  Y   F C+FV L    +    I LF         Y F+ L+  + +C  
Sbjct: 42  LFVYLFICLFVYL--FICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLF 99

Query: 263 TTLYLILFVFL 231
             L++ LFV+L
Sbjct: 100 VYLFICLFVYL 110



 Score = 35.9 bits (79), Expect = 0.96
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 440 LKIFMFICLRYYCRYFCCIFV-LAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCST 264
           L +++FICL  Y   F C+FV L    +    I LF         Y F+ L+  + +C  
Sbjct: 50  LFVYLFICLFVYL--FICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLF 107

Query: 263 TTLYLILFVFL 231
             L++ LFV+L
Sbjct: 108 VYLFICLFVYL 118



 Score = 35.9 bits (79), Expect = 0.96
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 440 LKIFMFICLRYYCRYFCCIFV-LAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCST 264
           L +++FICL  Y   F C+FV L    +    I LF         Y F+ L+  + +C  
Sbjct: 58  LFVYLFICLFVYL--FICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLF 115

Query: 263 TTLYLILFVFL 231
             L++ LFV+L
Sbjct: 116 VYLFICLFVYL 126



 Score = 35.9 bits (79), Expect = 0.96
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 440 LKIFMFICLRYYCRYFCCIFV-LAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCST 264
           L +++FICL  Y   F C+FV L    +    I LF         Y F+ L+  + +C  
Sbjct: 66  LFVYLFICLFVYL--FICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFICLF 123

Query: 263 TTLYLILFVFL 231
             L++ LFV+L
Sbjct: 124 VYLFICLFVYL 134


>UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial
           protein), complete cds; n=6; Eukaryota|Rep: Mus musculus
           ORFs (putative primordial protein), complete cds - Mus
           musculus (Mouse)
          Length = 250

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = -2

Query: 455 LFY*LLKIFM-FICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFL-KLYRS 282
           L Y  L I++  ICL  Y   + CI++     Y C S     + ++ +L Y  L  +Y S
Sbjct: 127 LSYVCLSIYLSIICLSVYLSIYLCIYLSIYLSYVCLSSICLSIYLSIYLSYVCLSSIYLS 186

Query: 281 ISLCSTTTLYLILFVFL 231
            ++      Y+ L ++L
Sbjct: 187 YAVYIIYLSYVCLLIYL 203


>UniRef50_Q38A12 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 160

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 14/61 (22%), Positives = 32/61 (52%)
 Frame = -2

Query: 422 ICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCSTTTLYLIL 243
           +C+ ++  Y CC+F+  ++      IS F +++T+ +      L+ S++L  T   ++  
Sbjct: 36  VCVCFFFNYCCCLFIYFSEHMCLCCISYFNVSLTTIIYTLVWFLFSSVTLWGTLPHFVTH 95

Query: 242 F 240
           F
Sbjct: 96  F 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,735,065
Number of Sequences: 1657284
Number of extensions: 11123354
Number of successful extensions: 28809
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28779
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)