Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g19f
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.79
AF024498-7|AAF39806.2| 279|Caenorhabditis elegans Serpentine re... 30 1.4
Z74034-2|CAE17843.1| 323|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81088-7|CAB03129.2| 337|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z79757-7|CAF31478.1| 314|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical ... 28 7.4
Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 9.8
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 27 9.8
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 9.8
AF025468-5|AAB71042.1| 390|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -2
Query: 431 FMFICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCSTTTLY 252
F+ C RYY ++ C +F+ A F +++FG+ L + + +I L +
Sbjct: 221 FVDFCRRYYIQHLCYVFLFA------FVLTMFGIAFHGSLIFHETVEFATIVLSVLAFFF 274
Query: 251 LILFV 237
+LFV
Sbjct: 275 FVLFV 279
>AF024498-7|AAF39806.2| 279|Caenorhabditis elegans Serpentine
receptor, class x protein104 protein.
Length = 279
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = -2
Query: 347 ISLFGLTITSFL*YFFLKLYRS--ISLCSTTTL--YLILFVFL 231
+S G+ I ++ YFFLKL ++ LCS+ T+ +ILF +L
Sbjct: 18 VSFCGILINFYMFYFFLKLQKTSFYVLCSSKTISNSIILFAYL 60
>Z74034-2|CAE17843.1| 323|Caenorhabditis elegans Hypothetical
protein F43A11.4 protein.
Length = 323
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -2
Query: 407 YCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCSTTTLYLILFVFL* 228
YC + I A P F +LFG+ IT F+ + +YR + + Y+ L F
Sbjct: 101 YCGFLIAINRFCAMYIPMFYSTLFGVKIT-FILTTLIFVYRIVKIIMELIHYIPLQCFSS 159
Query: 227 FRTVD*SFS 201
F + D S++
Sbjct: 160 FSSYDISWA 168
>Z81088-7|CAB03129.2| 337|Caenorhabditis elegans Hypothetical
protein F53F1.7 protein.
Length = 337
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = -2
Query: 407 YCRYFCCIFVLAAKQ--YPCFSISLFGLTITSFL*YFFLKLYRSISLCSTTTLYLILFVF 234
+CR F L ++ YP ++ ++ + ++ + FL L R + Y FV
Sbjct: 119 FCRVCAVCFPLFYQKLSYPKYTYTMQAIQLSGAVASVFLLLPREYKYVNENGGYYSAFVN 178
Query: 233 L*FRTVD*SF-SLLEYVDCWASADDRIANSLTHTFKLFKKVPSGSTA 96
FR +F ++LE + A + + +T+ FKL KKV S T+
Sbjct: 179 NEFRKPFFNFVAVLEILFVLAIVVNNLVTYITYRFKLKKKVLSRRTS 225
>Z79757-7|CAF31478.1| 314|Caenorhabditis elegans Hypothetical
protein F55B12.9 protein.
Length = 314
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = -2
Query: 356 CFSISLFGLTITSFL*YFFLKL------YRSISLCSTTTLYLILFVFL 231
C ISLFG + FL Y FL+ ++ I L T ++I F FL
Sbjct: 13 CLIISLFGSAVNFFLFYKFLRRDGKPNGFQKICLVKTLPNFVICFAFL 60
>AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical
protein F39E9.11 protein.
Length = 321
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 342 RNRETGILLSRQDKNTAEISTIVSQTYKHEYLQKLIE 452
RN+ +G+ + Q++N + T+VS T + L KL+E
Sbjct: 90 RNQVSGMFQTGQNQNFTTVHTLVSLTEHCQTLTKLVE 126
>Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical
protein F54B8.6 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/69 (18%), Positives = 32/69 (46%)
Frame = -2
Query: 443 LLKIFMFICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISLCST 264
L+K+ I + CC+ + C +F +++ F FF+ ++ ++S+
Sbjct: 3 LVKVASLILTIICSQSLCCLMIYLLYSIFCSKKIIFKPSLSIFYCRFFIDVFLTLSVSIN 62
Query: 263 TTLYLILFV 237
T +L++ +
Sbjct: 63 KTYFLLISI 71
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 765 HLLQRVSRRLRSKSLENFHGLAVWNCV 791
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 787 HLLQRVSRRLRSKSLENFHGLAVWNCV 813
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 787 HLLQRVSRRLRSKSLENFHGLAVWNCV 813
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 578 HLLQRVSRRLRSKSLENFHGLAVWNCV 604
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 885 HLLQRVSRRLRSKSLENFHGLAVWNCV 911
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 765 HLLQRVSRRLRSKSLENFHGLAVWNCV 791
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 787 HLLQRVSRRLRSKSLENFHGLAVWNCV 813
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 787 HLLQRVSRRLRSKSLENFHGLAVWNCV 813
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 578 HLLQRVSRRLRSKSLENFHGLAVWNCV 604
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 885 HLLQRVSRRLRSKSLENFHGLAVWNCV 911
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 596 HLLQRVSRRLRSKSLENFHGLAVWNCV 622
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 389 CIFVLAAKQYPCFSISLFGLTITSFL*YFFLKLYRSISL 273
CI K+ SLF L TSFL FL ++ +I L
Sbjct: 43 CILFKTPKEMSSVKWSLFNLQTTSFLLDLFLSVFGTIQL 81
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 512 HLVSSVSKVLRQRTKDTLHLLPCWRCL 592
HL+ VS+ LR ++ + H L W C+
Sbjct: 556 HLLQRVSRRLRSKSLENFHGLAVWNCV 582
>AF025468-5|AAB71042.1| 390|Caenorhabditis elegans Hypothetical
protein T27A1.4 protein.
Length = 390
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 435 DIHVYMSAILLSIFLLYFCPGG*AVSLFLYFSLWSH 328
D HVY SA +S + +F P SLFL W H
Sbjct: 231 DAHVYFSASTISGLMSWFLP-----SLFLLIGSWLH 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,101,393
Number of Sequences: 27780
Number of extensions: 275127
Number of successful extensions: 881
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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