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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g18f
         (612 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5)                      30   1.7  
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_58268| Best HMM Match : Extensin_2 (HMM E-Value=0.002)              30   1.7  
SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1)                  30   1.7  
SB_33746| Best HMM Match : MAM (HMM E-Value=8.4e-13)                   29   2.2  
SB_48608| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_40674| Best HMM Match : Extensin_2 (HMM E-Value=0.19)               29   3.0  
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)            29   3.9  
SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_10252| Best HMM Match : tRNA-synt_2b (HMM E-Value=3.2e-32)          28   5.2  
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6)                 28   6.9  
SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_45611| Best HMM Match : p450 (HMM E-Value=0)                        27   9.1  
SB_27646| Best HMM Match : CbiK (HMM E-Value=2.2)                      27   9.1  
SB_9731| Best HMM Match : Lig_chan (HMM E-Value=3.7e-05)               27   9.1  

>SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5)
          Length = 260

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 285 W*AKSMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMT 151
           W +   +F++  SI  + A+L     F F    H+  AV+YS  T
Sbjct: 127 WQSSRFMFIMRLSILSYAAALFHDQGFEFSLGLHILAAVAYSVRT 171


>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 164 YETAIAKCSEYLKEK--KGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP 331
           Y + I K  E+ KEK  KG+  K    R  E GKR     A     +D  E +K +FP
Sbjct: 261 YPSLIDKLQEHEKEKELKGKRKKSKTSRSPEKGKREEEKDALLKQEEDEIERMKQFFP 318


>SB_58268| Best HMM Match : Extensin_2 (HMM E-Value=0.002)
          Length = 458

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 136 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 169



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 150 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 183



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 164 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 197



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 178 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTRCT 211



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 220 PLTKCTYYRKRRCPPLTKCTNYRKRRCPPLTRCT 253



 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  + T Y  R CPP T  T
Sbjct: 290 PLTKRTNYRKKRYPPLTRCTNYRKRRCPPLTRCT 323



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P T+         PP  K T Y  R CPP T  T
Sbjct: 122 PLTRCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 155



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  + T Y  R CPP T  T
Sbjct: 192 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 225



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  + T Y  R CPP T  T
Sbjct: 234 PLTKCTNYRKRRCPPLTRCTNYLKRRCPPLTRCT 267



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 486 PPCWKTTEYTSRSCPPKTNST 548
           PP  K T Y  R CPP T  T
Sbjct: 275 PPLTKCTNYLKRRCPPLTKRT 295



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 416 PLTKGNYYRKRRCPPLTKGTNYRKRRCPPLTRCT 449



 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +3

Query: 429 KLHSVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKT 539
           K     P TK         PP  K T Y  R CPP T
Sbjct: 46  KTRRCNPLTKGNYYRKRRCPPLTKCTNYRKRRCPPLT 82



 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P T+         PP  K T Y  R CPP T  T
Sbjct: 206 PLTRCTNYRKRRCPPLTKCTYYRKRRCPPLTKCT 239


>SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1)
          Length = 259

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 189 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTRCT 222



 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  K T Y  R CPP T  T
Sbjct: 147 PLTKCTNYLKRRCPPLTKCTNYRKRRCPPLTRCT 180



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  + T Y  R CPP T  T
Sbjct: 35  PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTRCT 68



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  + T Y  R CPP T  T
Sbjct: 161 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 194



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P T+         PP  K T Y  R CPP T  T
Sbjct: 175 PLTRCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 208



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 486 PPCWKTTEYTSRSCPPKTNST 548
           PP  K T Y  R CPP T  T
Sbjct: 34  PPLTKCTNYRKRRCPPLTRCT 54



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 486 PPCWKTTEYTSRSCPPKTNST 548
           PP  K T Y  R CPP T  T
Sbjct: 146 PPLTKCTNYLKRRCPPLTKCT 166



 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P T+         PP  + T Y  R CPP T  T
Sbjct: 49  PLTRCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 82


>SB_33746| Best HMM Match : MAM (HMM E-Value=8.4e-13)
          Length = 618

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
 Frame = -1

Query: 573 EPFVLSSFRYCLSSVDMILKYTL-LFSN----TGVNFQE--TFLLVLSLESPNAILLWFC 415
           +P    S+  C     +I  Y + L SN    TGV F E   +   L L S +++ +++ 
Sbjct: 485 KPVDTLSYLVCFGCPPVISSYNIHLGSNEEQTTGVQFDEFAVYCKPLELASVDSMYIFYK 544

Query: 414 WSINLRA*WSLLFMSLTVCSVKITLNWMGK*DL 316
            ++ LRA ++LLF   T      +L + G  DL
Sbjct: 545 GALGLRANYTLLFPDKTWSYYWTSLEYSGLLDL 577


>SB_48608| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 321

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/45 (33%), Positives = 29/45 (64%)
 Frame = -1

Query: 591 MIRSSLEPFVLSSFRYCLSSVDMILKYTLLFSNTGVNFQETFLLV 457
           MI +  EP +L+  +Y ++S+   +K+T  +S T +NF +T++ V
Sbjct: 106 MIWTHDEPSLLNFLQY-INSIHPTIKFTHEYSPTRINFLDTYIHV 149


>SB_40674| Best HMM Match : Extensin_2 (HMM E-Value=0.19)
          Length = 291

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +3

Query: 441 VTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           ++P TK         PP  + T Y  R CPP T  T
Sbjct: 1   MSPLTKRTYYRKKRYPPLTRCTNYRKRRCPPLTRCT 36



 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548
           P TK         PP  + T Y  R CPP T  T
Sbjct: 226 PLTKCTNYRKRRCPPLTRCTNYLKRRCPPLTKCT 259



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 486 PPCWKTTEYTSRSCPPKTNST 548
           PP  K T Y  R CPP T  T
Sbjct: 225 PPLTKCTNYRKRRCPPLTRCT 245



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 486 PPCWKTTEYTSRSCPPKTNST 548
           PP  K T Y  R CPP T  T
Sbjct: 253 PPLTKCTNYLKRRCPPLTKCT 273



 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKT 539
           P TK         PP  K T Y  R CPP T
Sbjct: 254 PLTKCTNYLKRRCPPLTKCTNYRKRRCPPLT 284


>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 438 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCP 530
           S++P +   R S GSL P  +T+  TSRS P
Sbjct: 179 SISPASPALRSSLGSLAPTSRTSTPTSRSTP 209


>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
          Length = 432

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 27/117 (23%), Positives = 51/117 (43%)
 Frame = +1

Query: 202 GKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQ 381
           G+  R   G RE SDR+++ E    R    D+G  G+R+            R D  AH  
Sbjct: 151 GESSRIRSGDREKSDREKEREKERRRRRHEDEG-SGDRR----------RERRDKDAHDP 199

Query: 382 KGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPE 552
           + P R + D   K ++        ++ ++S L+   R+ +++  L + + + +   E
Sbjct: 200 EDPKRREKDDKKKSRERSKG--DEEHTKDSKLDEEDRIRRREKELLETLKQEEEAVE 254


>SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 673

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +1

Query: 346 DLHRADCQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDH 525
           DLH  + Q  +Q G     + +  + QQ  ++  Q+Q QQ+ L +   +    +  L   
Sbjct: 558 DLHEEEVQHQQQFGLQEQSLGQEQRKQQQQLQQQQQQKQQQQLQKKQQKQSSMEEKLSSE 617

Query: 526 VHR 534
           + +
Sbjct: 618 IEK 620


>SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1278

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = +1

Query: 424  QQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPEAR 558
            QQ C   LQR    +S LE YP  GK    L +H   RQ V + R
Sbjct: 925  QQMCASDLQRLPYCQSQLEKYPGQGKLVPCLLEH---RQNVTDTR 966


>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 975

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 194 YLKEKKGEVIKEAVKRLIENGKRNTMDFAY 283
           + +E+ GE   EA KRLI+ GK+  M   Y
Sbjct: 676 FREEEDGESFAEAKKRLIKQGKQQIMFLLY 705


>SB_10252| Best HMM Match : tRNA-synt_2b (HMM E-Value=3.2e-32)
          Length = 734

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 482 FTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGD 601
           FT + E      K MS E+KQ  K DN KG S+ +   GD
Sbjct: 204 FTEMEEKIDEKVKEMSLEEKQPQKKDNQKGKSEKKKGKGD 243


>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 383 RDHHALKLIDQQNHNK-IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLD 559
           R HH+   +  +   K +    SKD T+  VS +   + E  ++    M+T +K  +K+ 
Sbjct: 418 RRHHSFGGLPLEYREKRLRESSSKDNTNTSVSLEIKKIREAQKLIDAAMATSEKS-IKVG 476

Query: 560 NTKGSSDDR 586
            +KG  D +
Sbjct: 477 ESKGLWDSK 485


>SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6)
          Length = 261

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 444 TPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTN 542
           +PKT P           WKT+  T R   PKT+
Sbjct: 41  SPKTSPKTSPKTGRKTSWKTSTKTGRKTSPKTS 73


>SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 546

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +2

Query: 164 YETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQ---LWTKDGKEIVKSYFPI 334
           Y   + KC  Y+ + +G  ++  + +     KR  M    +   LWT   ++I K Y   
Sbjct: 456 YPAGLTKCLSYVADDRGRALRLVLTKT--EAKRIPMLNRPEEGFLWTSTQQQITKGYESA 513

Query: 335 QFRVIFTEQTVKLI 376
             R+   + T +++
Sbjct: 514 HIRLARNDSTTRIV 527


>SB_45611| Best HMM Match : p450 (HMM E-Value=0)
          Length = 847

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
 Frame = +2

Query: 158 GEYETAIAKCSEYLKEKKGEVIKE-AVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
           G ++ A       +K+K  +VI   A+K  +       ++F  + WT      ++   P+
Sbjct: 402 GTFKKAKRVIKHAVKDKSSDVIDRWAIKEALA---LQPVEFGGRPWTVSFDLALRGERPL 458

Query: 335 QFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKD 454
            F      + VKL  K  H ALK+  Q+ + ++   ++++
Sbjct: 459 VFEDY--GRHVKLHRKMGHRALKVYSQKKYQQVIIQEAEE 496


>SB_27646| Best HMM Match : CbiK (HMM E-Value=2.2)
          Length = 423

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
 Frame = +2

Query: 197 LKEKKGEVIKEAVKRLIENGKRNTMDF--AYQLWTKD---GKEIVKSYFPIQFRVI-FTE 358
           LKEK  E IKE+ K + +  + + MDF  +  L   +   GK + +     Q RV+ F +
Sbjct: 233 LKEKFEEGIKESKKEIEDADQYDKMDFPLSDNLPVPEVAYGKHLKRKVLDRQGRVVSFFD 292

Query: 359 QTVKLINKRDHHALKLIDQQNHNKIA---FGDSKDKTSKKVSWKFTPVLENNRVYFKIMS 529
               L  K D  AL+L     ++  A   + +SKD     VSW    +  +  +  +I  
Sbjct: 293 ---GLFTKGDLDALRLYLLHYNSAYAYQGYDESKDTEHDNVSW-IAGIKVSKFIKSRIWK 348

Query: 530 TEDKQYLKLDNTKG 571
           T +     + N KG
Sbjct: 349 TINSAVEYISNEKG 362


>SB_9731| Best HMM Match : Lig_chan (HMM E-Value=3.7e-05)
          Length = 435

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +2

Query: 374 INKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST-EDKQYL 550
           +NK +H    + D  +   IA+G +  + ++ +     PV E    Y +   T ED    
Sbjct: 22  VNKYEHPIKSIEDLADQQGIAYGTAPGQLAEMLKTASLPVYEKLWRYIETHGTLEDNATY 81

Query: 551 KLDNTKGSSDDRIIYGDS 604
            +D  + S DD     DS
Sbjct: 82  AIDKVR-SRDDYAFIWDS 98


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,759,943
Number of Sequences: 59808
Number of extensions: 438265
Number of successful extensions: 1593
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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