Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g18f
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089239-1|AAL89977.1|  319|Drosophila melanogaster AT02809p pro...    29   3.7  
AE014134-371|AAN10418.1|  319|Drosophila melanogaster CG31682-PA...    29   3.7  
X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.       29   4.9  
BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p pro...    29   4.9  
AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA...    29   4.9  
AY089514-1|AAL90252.1|  709|Drosophila melanogaster GH23026p pro...    29   6.5  
AE014297-807|AAS65127.1|  709|Drosophila melanogaster CG9801-PC,...    29   6.5  
AE014297-806|AAF54283.1|  709|Drosophila melanogaster CG9801-PB,...    29   6.5  
AE014297-805|AAF54282.1|  709|Drosophila melanogaster CG9801-PA,...    29   6.5  
BT029144-1|ABJ17078.1|  423|Drosophila melanogaster RT01017p pro...    28   8.6  
BT004877-1|AAO45233.1|  370|Drosophila melanogaster GH26270p pro...    28   8.6  
AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB...    28   8.6  
AE014297-3078|AAF55942.1|  370|Drosophila melanogaster CG6439-PA...    28   8.6  
AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,...    28   8.6  
AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,...    28   8.6  
AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,...    28   8.6  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    28   8.6  

>AY089239-1|AAL89977.1|  319|Drosophila melanogaster AT02809p
           protein.
          Length = 319

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 522 ILKYTLLFSNTGVNFQETFLLVLSLESPNAILLWFCWSINL 400
           I+KY    +N  +   ETF  V S +  N+ +LW C  ++L
Sbjct: 80  IMKYGFPSTND-ITINETFDFVTSFDRRNSAILWMCERVDL 119


>AE014134-371|AAN10418.1|  319|Drosophila melanogaster CG31682-PA
           protein.
          Length = 319

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 522 ILKYTLLFSNTGVNFQETFLLVLSLESPNAILLWFCWSINL 400
           I+KY    +N  +   ETF  V S +  N+ +LW C  ++L
Sbjct: 80  IMKYGFPSTND-ITINETFDFVTSFDRRNSAILWMCERVDL 119


>X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 12/141 (8%)
 Frame = +2

Query: 200 KEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP-IQFRVIFT---EQTV 367
           K K+ E  K+  K+  ++GK      A+ LW  D +E +K   P I+   I     E   
Sbjct: 535 KHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWK 594

Query: 368 KLINKRDHHALKLIDQQ-------NHNKIAFGDS-KDKTSKKVSWKFTPVLENNRVYFKI 523
           +L +K         D+Q       N+   A GDS  +K  K    + T    + +     
Sbjct: 595 ELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSG 654

Query: 524 MSTEDKQYLKLDNTKGSSDDR 586
              + K+Y+  D++  S D++
Sbjct: 655 SGFKSKEYISDDDSTSSDDEK 675


>BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p
           protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 12/141 (8%)
 Frame = +2

Query: 200 KEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP-IQFRVIFT---EQTV 367
           K K+ E  K+  K+  ++GK      A+ LW  D +E +K   P I+   I     E   
Sbjct: 535 KHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWK 594

Query: 368 KLINKRDHHALKLIDQQ-------NHNKIAFGDS-KDKTSKKVSWKFTPVLENNRVYFKI 523
           +L +K         D+Q       N+   A GDS  +K  K    + T    + +     
Sbjct: 595 ELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSG 654

Query: 524 MSTEDKQYLKLDNTKGSSDDR 586
              + K+Y+  D++  S D++
Sbjct: 655 SGFKSKEYISDDDSTSSDDEK 675


>AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA
           protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 12/141 (8%)
 Frame = +2

Query: 200 KEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP-IQFRVIFT---EQTV 367
           K K+ E  K+  K+  ++GK      A+ LW  D +E +K   P I+   I     E   
Sbjct: 535 KHKEKERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWK 594

Query: 368 KLINKRDHHALKLIDQQ-------NHNKIAFGDS-KDKTSKKVSWKFTPVLENNRVYFKI 523
           +L +K         D+Q       N+   A GDS  +K  K    + T    + +     
Sbjct: 595 ELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPSPSKKANTSG 654

Query: 524 MSTEDKQYLKLDNTKGSSDDR 586
              + K+Y+  D++  S D++
Sbjct: 655 SGFKSKEYISDDDSTSSDDEK 675


>AY089514-1|AAL90252.1|  709|Drosophila melanogaster GH23026p
           protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 429 KLHSVTPKTKPARKSPGSLPP 491
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014297-807|AAS65127.1|  709|Drosophila melanogaster CG9801-PC,
           isoform C protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 429 KLHSVTPKTKPARKSPGSLPP 491
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014297-806|AAF54283.1|  709|Drosophila melanogaster CG9801-PB,
           isoform B protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 429 KLHSVTPKTKPARKSPGSLPP 491
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014297-805|AAF54282.1|  709|Drosophila melanogaster CG9801-PA,
           isoform A protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 429 KLHSVTPKTKPARKSPGSLPP 491
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>BT029144-1|ABJ17078.1|  423|Drosophila melanogaster RT01017p
           protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
 Frame = +1

Query: 370 AHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDH--VHRRQT 543
           +H     S  Q  +  + QQ      Q+  QQ+   +  P+  +QQ    DH  VH  Q 
Sbjct: 299 SHDLHSDSSSQQQQQQQQQQQQQHQQQQHQQQQQRTQTTPQPTQQQHYTHDHSAVHSEQQ 358

Query: 544 VP 549
           VP
Sbjct: 359 VP 360


>BT004877-1|AAO45233.1|  370|Drosophila melanogaster GH26270p
           protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 212 GEVIKEAVKRLIENGKRNTMDFAYQLWTKD 301
           GE+I+ A+ +++ +GK  T D   Q  T+D
Sbjct: 331 GEIIQNAINKVLNDGKVRTKDLGGQSTTQD 360


>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
           protein.
          Length = 1003

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 132 SASTSSVLGASVALEASAHTAR 67
           +A+  S+LGA+ AL+ASAH  R
Sbjct: 260 AAAVESLLGAAAALQASAHVQR 281


>AE014297-3078|AAF55942.1|  370|Drosophila melanogaster CG6439-PA
           protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 212 GEVIKEAVKRLIENGKRNTMDFAYQLWTKD 301
           GE+I+ A+ +++ +GK  T D   Q  T+D
Sbjct: 331 GEIIQNAINKVLNDGKVRTKDLGGQSTTQD 360


>AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,
            isoform B protein.
          Length = 1314

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 248  ENGKRNTMDFAYQ----LWTKDGK--EIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLI 409
            E G ++T D +++    ++  DGK  +IVK YFP +  ++ T  ++      D     +I
Sbjct: 902  ELGIKHTPDESWRRQECIFAMDGKTWQIVKDYFPEEMEILLTRGSIYARMSPDQKQALVI 961

Query: 410  DQQN 421
            + QN
Sbjct: 962  ELQN 965


>AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,
            isoform A protein.
          Length = 1314

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 248  ENGKRNTMDFAYQ----LWTKDGK--EIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLI 409
            E G ++T D +++    ++  DGK  +IVK YFP +  ++ T  ++      D     +I
Sbjct: 902  ELGIKHTPDESWRRQECIFAMDGKTWQIVKDYFPEEMEILLTRGSIYARMSPDQKQALVI 961

Query: 410  DQQN 421
            + QN
Sbjct: 962  ELQN 965


>AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,
            isoform G protein.
          Length = 1388

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 248  ENGKRNTMDFAYQ----LWTKDGK--EIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLI 409
            E G ++T D +++    ++  DGK  +IVK YFP +  ++ T  ++      D     +I
Sbjct: 976  ELGIKHTPDESWRRQECIFAMDGKTWQIVKDYFPEEMEILLTRGSIYARMSPDQKQALVI 1035

Query: 410  DQQN 421
            + QN
Sbjct: 1036 ELQN 1039


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSST 596
           P T P+   P +  P   TT  TSR       ST ++ TR+    T  ST
Sbjct: 370 PTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTTTTPRST 419


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,002,321
Number of Sequences: 53049
Number of extensions: 618079
Number of successful extensions: 2743
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2735
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)