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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g18f
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical...    32   0.37 
Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical pr...    31   0.49 
Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical pr...    31   0.65 
DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated...    31   0.65 
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U53332-7|AAM15582.1|  379|Caenorhabditis elegans Ceramide glucos...    29   2.0  
U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucos...    29   2.0  
DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide glyc...    29   2.0  
DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide glyc...    29   2.0  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    29   2.6  
Z22180-4|CAA80178.1|  312|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical...    28   4.6  
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical...    28   4.6  
U39854-2|AAA81077.2|  703|Caenorhabditis elegans Puf (pumilio/fb...    28   4.6  
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z22173-2|CAA80126.1|  327|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.     28   6.0  
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso...    28   6.0  
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    28   6.0  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    28   6.0  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    28   6.0  
AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical ...    28   6.0  
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.     28   6.0  
Z81068-8|CAB02988.1|  490|Caenorhabditis elegans Hypothetical pr...    27   8.0  
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    27   8.0  
U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    27   8.0  
AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical
           protein Y71H2B.1 protein.
          Length = 143

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 137 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 250
           LYM   +G+Y+   A KC +Y K+  G+   EA++  I+
Sbjct: 87  LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125


>Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical
           protein F15A4.8b protein.
          Length = 808

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +3

Query: 438 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPL 611
           +VT  T        ++P    TT   S + PP  ++T + +T+      V ST IAP+
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPV 464


>Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical
           protein C45B11.1a protein.
          Length = 522

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -1

Query: 228 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 49
           ++I  P  SFRY+  L   ++ SPM ++  S S   S+     V + ++ H+ R     V
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135

Query: 48  S 46
           S
Sbjct: 136 S 136


>Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical
           protein C08H9.11 protein.
          Length = 459

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +2

Query: 191 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 361
           EY +    E  +   VK ++   K+N +D     WT+   E +KSY  F  + R  FTE 
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245

Query: 362 TVKLINKRDHHALKLI 409
             K  N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261


>DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated
           kinase PAK-2 protein.
          Length = 522

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -1

Query: 228 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 49
           ++I  P  SFRY+  L   ++ SPM ++  S S   S+     V + ++ H+ R     V
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135

Query: 48  S 46
           S
Sbjct: 136 S 136


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 447 PKTKPARKSPGSLPPCWKTTE--YTSRSCPPKTNST*SSITRKVLVMTVSSTVIA 605
           PKT+P    P ++P CW+     +     PP+ N+T   I  K       + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472


>U53332-7|AAM15582.1|  379|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform c protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -1

Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform b protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -1

Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -1

Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -1

Query: 183 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 31
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L +
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
           lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 223 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQYVISSWCKCGVRSQRTHGEDEG 59
           DN + +  Q FR+ G S +     +  +       ISSW +C  +     GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849


>Z22180-4|CAA80178.1|  312|Caenorhabditis elegans Hypothetical
           protein K11H3.3 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 215 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 304
           +V+K  ++ L     +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271


>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
            twisted, animalsroll when moving protein 3, isoform b
            protein.
          Length = 1250

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
 Frame = +2

Query: 344  VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 499
            ++ T++ +K++N     +R  H L L      +KI F D     D +   + W  +P LE
Sbjct: 911  IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970

Query: 500  NNRVYFKIMSTEDK 541
               V FK+    +K
Sbjct: 971  AGTVLFKVSIFREK 984


>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
            twisted, animalsroll when moving protein 3, isoform a
            protein.
          Length = 2456

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
 Frame = +2

Query: 344  VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 499
            ++ T++ +K++N     +R  H L L      +KI F D     D +   + W  +P LE
Sbjct: 911  IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970

Query: 500  NNRVYFKIMSTEDK 541
               V FK+    +K
Sbjct: 971  AGTVLFKVSIFREK 984


>U39854-2|AAA81077.2|  703|Caenorhabditis elegans Puf (pumilio/fbf)
           domain-containingprotein 9 protein.
          Length = 703

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +2

Query: 131 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 310
           E+ Y   ++GE E  + KC   +K++ G      ++++IE  +   + F    +TK+  +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493

Query: 311 IV--KSYFPIQFRVI 349
            V   S  P   RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508


>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
           protein F37D6.1 protein.
          Length = 1227

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = -3

Query: 574 RTFRVIELQVLFVFGGHDLEVYSVVFQHGGKLPGDFLAGFVFGVTECNFVVVLLVDQLEG 395
           R F  +E+ +  + G        ++  HGGK+PG          T C++   L+ D++ G
Sbjct: 273 RVFEGLEMAITSIDGADRTNFIQLIEDHGGKVPG------TMSKTRCSY---LISDKITG 323

Query: 394 VMVPFVYELDSL 359
           V      E  S+
Sbjct: 324 VKYAKAVEWKSM 335


>Z22173-2|CAA80126.1|  327|Caenorhabditis elegans Hypothetical
           protein C15H7.4 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 95  ATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGK 259
           AT +P  +  L ++   +V  G  E  +A   +   EKK EV+     + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190


>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
          Length = 4250

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 155  IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
            IG+ + A    S+ LK  +GE+ K A K +IE      +      W KDGKEI KS F  
Sbjct: 3825 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3879

Query: 335  QFRVIFTEQTVKLINKRDHHA 397
                  T  ++ +    + HA
Sbjct: 3880 LITTTPTNSSLHIGRLENSHA 3900


>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform b protein.
          Length = 4203

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 155  IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
            IG+ + A    S+ LK  +GE+ K A K +IE      +      W KDGKEI KS F  
Sbjct: 3778 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3832

Query: 335  QFRVIFTEQTVKLINKRDHHA 397
                  T  ++ +    + HA
Sbjct: 3833 LITTTPTNSSLHIGRLENSHA 3853


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform a protein.
          Length = 4488

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 155  IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
            IG+ + A    S+ LK  +GE+ K A K +IE      +      W KDGKEI KS F  
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117

Query: 335  QFRVIFTEQTVKLINKRDHHA 397
                  T  ++ +    + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform d protein.
          Length = 4369

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 155  IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
            IG+ + A    S+ LK  +GE+ K A K +IE      +      W KDGKEI KS F  
Sbjct: 4063 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4117

Query: 335  QFRVIFTEQTVKLINKRDHHA 397
                  T  ++ +    + HA
Sbjct: 4118 LITTTPTNSSLHIGRLENSHA 4138


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform c protein.
          Length = 4447

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 155  IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
            IG+ + A    S+ LK  +GE+ K A K +IE      +      W KDGKEI KS F  
Sbjct: 4022 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 4076

Query: 335  QFRVIFTEQTVKLINKRDHHA 397
                  T  ++ +    + HA
Sbjct: 4077 LITTTPTNSSLHIGRLENSHA 4097


>AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical
           protein F38A1.4 protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 229 FLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQYVIS 113
           F+  + LLF+ +   F    + F NDD  I+ LC   +S
Sbjct: 13  FISQMCLLFILLVFLFYTDKVCFDNDDKEIKGLCYKFVS 51


>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
          Length = 4219

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 155  IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334
            IG+ + A    S+ LK  +GE+ K A K +IE      +      W KDGKEI KS F  
Sbjct: 3794 IGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVKVT---WLKDGKEI-KSTFRT 3848

Query: 335  QFRVIFTEQTVKLINKRDHHA 397
                  T  ++ +    + HA
Sbjct: 3849 LITTTPTNSSLHIGRLENSHA 3869


>Z81068-8|CAB02988.1|  490|Caenorhabditis elegans Hypothetical
           protein F25H5.7 protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 140 YMSVVIGEYETAIAKCSEYLKEKKGEVIK 226
           Y+ ++   +E  + KC+ Y  EK GEV+K
Sbjct: 270 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 298


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 185 CSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 304
           C+E +K+KK +V  +A+KRL++             ++KDG
Sbjct: 436 CAERMKDKKPKVRIQAIKRLMDLYNHVMTSSPQPFFSKDG 475


>U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical
           protein F55F8.7 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 140 YMSVVIGEYETAIAKCSEYLKEKKGEVIK 226
           Y+ ++   +E  + KC+ Y  EK GEV+K
Sbjct: 271 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 299


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 185 CSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 304
           C+E +K+KK +V  +A+KRL++             ++KDG
Sbjct: 436 CAERMKDKKPKVRIQAIKRLMDLYNHVMTSSPQPFFSKDG 475


>AF047659-5|AAC04429.1|  347|Caenorhabditis elegans Hypothetical
           protein K07H8.8 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +2

Query: 275 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKD 454
           FA Q W  D K  +K+   IQ+    TE+   + N       + + ++N N++    SK 
Sbjct: 244 FAPQTWYCDMKNNIKNSTVIQYSSTGTEKIKMIDNLLTVFKNRNVPEENLNEVREELSKG 303

Query: 455 KTSKKVS 475
           KT    S
Sbjct: 304 KTQHSTS 310


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,348,731
Number of Sequences: 27780
Number of extensions: 315262
Number of successful extensions: 1316
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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