Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g17r
         (763 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q81SX2 Cluster: Membrane protein, putative; n=11; Bacil...    34   4.4  

>UniRef50_Q81SX2 Cluster: Membrane protein, putative; n=11; Bacillus
           cereus group|Rep: Membrane protein, putative - Bacillus
           anthracis
          Length = 203

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = +3

Query: 543 LNGPLLSALYITCLSKYLLLCSAYEGFVYYIPFCTVPFIPLFRGINLPYAYGELQFLGDT 722
           L+  L+ A  +    + L LCS Y G +    F T+    +FR ++ PY YG L FL   
Sbjct: 111 LSSALVYAAVLLHEDRILRLCSLYIGMLQGELFVTI----IFRKLHFPYDYGSLAFLDSV 166

Query: 723 WRTGELYXILF 755
             +     ILF
Sbjct: 167 AVSTFFMAILF 177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,063,401
Number of Sequences: 1657284
Number of extensions: 9228897
Number of successful extensions: 17325
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 16678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17314
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)