Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g17f
(601 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15104 Cluster: Glutamine synthetase; n=312; cellular o... 145 6e-34
UniRef50_Q7T2P7 Cluster: Glutamine synthetase; n=4; Coelomata|Re... 145 8e-34
UniRef50_Q42688 Cluster: Glutamine synthetase cytosolic isozyme;... 132 5e-30
UniRef50_A1L199 Cluster: Glutamine synthetase; n=24; Eukaryota|R... 125 7e-28
UniRef50_Q43127 Cluster: Glutamine synthetase, chloroplast/mitoc... 118 1e-25
UniRef50_Q874T6 Cluster: Glutamine synthetase; n=5; Fungi/Metazo... 108 9e-23
UniRef50_O96463 Cluster: Glutamine synthetase; n=1; Skeletonema ... 107 1e-22
UniRef50_Q5UR44 Cluster: Putative glutamine synthetase; n=1; Aca... 105 1e-21
UniRef50_A0DB13 Cluster: Chromosome undetermined scaffold_44, wh... 98 1e-19
UniRef50_UPI0000F20B38 Cluster: PREDICTED: hypothetical protein;... 83 4e-15
UniRef50_Q4QJ42 Cluster: Glutamine synthetase, putative; n=12; E... 83 4e-15
UniRef50_Q7M314 Cluster: Glutamate-ammonia ligase; n=1; Bos taur... 79 1e-13
UniRef50_A0PCY1 Cluster: Glutamine synthetase precursor; n=1; Gu... 77 2e-13
UniRef50_Q42689 Cluster: Glutamine synthetase, chloroplast precu... 70 5e-11
UniRef50_P20805 Cluster: Glutamine synthetase 2; n=19; Frankia|R... 69 6e-11
UniRef50_Q6N241 Cluster: Glutamine synthetase II; n=16; Bacteria... 65 1e-09
UniRef50_P04772 Cluster: Glutamine synthetase 2; n=211; Bacteria... 65 1e-09
UniRef50_UPI000065D6C6 Cluster: Rho guanine nucleotide exchange ... 37 0.32
UniRef50_Q9BIT1 Cluster: Fibroin 2; n=1; Plectreurys tristis|Rep... 34 2.2
UniRef50_Q5A3J6 Cluster: Potential CCR4-NOT complex associated f... 33 3.9
UniRef50_UPI0000E48261 Cluster: PREDICTED: similar to AGL019Wp; ... 33 6.8
UniRef50_A6LWB4 Cluster: SEC-C motif domain protein; n=1; Clostr... 33 6.8
UniRef50_Q4YGB8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_O41930 Cluster: DNA polymerase; n=128; Gammaherpesvirin... 32 9.0
UniRef50_Q0UJ67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 9.0
UniRef50_Q6UWJ8 Cluster: CD164 sialomucin-like 2 protein precurs... 32 9.0
>UniRef50_P15104 Cluster: Glutamine synthetase; n=312; cellular
organisms|Rep: Glutamine synthetase - Homo sapiens
(Human)
Length = 373
Score = 145 bits (352), Expect = 6e-34
Identities = 65/132 (49%), Positives = 90/132 (68%)
Frame = +3
Query: 204 LTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPI 383
+T S ++ L+K + Y LP +K+ A YIWIDG+GE LRCK RTL+ PK ++LP
Sbjct: 1 MTTSASSHLNKGIKQVYMSLP-QGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPE 59
Query: 384 WNFDGSSTNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQE 563
WNFDGSST Q++G NSD YLVP A+++DPFR+ + LV+C+ +KYN P E+N R +C+
Sbjct: 60 WNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKR 119
Query: 564 AYDKCKDDEPWF 599
D + PWF
Sbjct: 120 IMDMVSNQHPWF 131
>UniRef50_Q7T2P7 Cluster: Glutamine synthetase; n=4; Coelomata|Rep:
Glutamine synthetase - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 371
Score = 145 bits (351), Expect = 8e-34
Identities = 64/132 (48%), Positives = 92/132 (69%)
Frame = +3
Query: 204 LTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPI 383
+ S ++ LSK + +Y +LP D++ A YIWIDG+GE LRCK RTL+ PK+ +DLP
Sbjct: 1 MATSASSQLSKVVKQQYMELP-QGDQVQAMYIWIDGTGEGLRCKTRTLDSEPKSIEDLPE 59
Query: 384 WNFDGSSTNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQE 563
WNFDGSST QA+G NSD YL+P A+++DPFR+ + LV+C+ KYN + E+N+R +C++
Sbjct: 60 WNFDGSSTYQAEGSNSDMYLIPAAMFRDPFRKDPNKLVLCEVVKYNRKTAETNHRHTCKK 119
Query: 564 AYDKCKDDEPWF 599
+ PWF
Sbjct: 120 IMEMVGHQSPWF 131
>UniRef50_Q42688 Cluster: Glutamine synthetase cytosolic isozyme;
n=6; Eukaryota|Rep: Glutamine synthetase cytosolic
isozyme - Chlamydomonas reinhardtii
Length = 382
Score = 132 bits (320), Expect = 5e-30
Identities = 62/117 (52%), Positives = 79/117 (67%), Gaps = 10/117 (8%)
Frame = +3
Query: 279 KILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAI 458
KI A Y+WI GS +R K RTL+ IP P+DLP WN+DGSST QA GH+S+ YL+PR+I
Sbjct: 37 KICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSI 96
Query: 459 YKDPFRRGNHILVMCDTY---KYNME-------PTESNNRISCQEAYDKCKDDEPWF 599
+KDPFR G++ILVMCD Y K N + P +N R +C E +K K +EPWF
Sbjct: 97 FKDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEVMEKAKKEEPWF 153
>UniRef50_A1L199 Cluster: Glutamine synthetase; n=24; Eukaryota|Rep:
Glutamine synthetase - Homo sapiens (Human)
Length = 258
Score = 125 bits (302), Expect = 7e-28
Identities = 52/101 (51%), Positives = 71/101 (70%)
Frame = +3
Query: 297 IWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKDPFR 476
+W G+GE LRCK RTL+ PK ++LP WNFDGSST Q++G NSD YLVP A+++DPFR
Sbjct: 1 LWAGGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFR 60
Query: 477 RGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWF 599
+ + LV+C+ +KYN P E+N R +C+ D + PWF
Sbjct: 61 KDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWF 101
>UniRef50_Q43127 Cluster: Glutamine synthetase,
chloroplast/mitochondrial precursor; n=594;
Viridiplantae|Rep: Glutamine synthetase,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 430
Score = 118 bits (284), Expect = 1e-25
Identities = 62/148 (41%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Frame = +3
Query: 165 KIEDNPKILSGPVLT-NSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDR 341
K + N K+ VL S N+ +++ D +D+I+A YIWI GSG LR K R
Sbjct: 37 KKQSNNKVRGFRVLALQSDNSTVNRVETLLNLDTKPYSDRIIAEYIWIGGSGIDLRSKSR 96
Query: 342 TLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYN 521
T+ + P +LP WN+DGSST QA G +S+ L P+AI++DPFR GN+ILV+CDT+
Sbjct: 97 TIEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPA 156
Query: 522 MEPTESNNRISCQEAYD--KCKDDEPWF 599
EP +N R E + K + PWF
Sbjct: 157 GEPIPTNKRAKAAEIFSNKKVSGEVPWF 184
>UniRef50_Q874T6 Cluster: Glutamine synthetase; n=5; Fungi/Metazoa
group|Rep: Glutamine synthetase - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 372
Score = 108 bits (260), Expect = 9e-23
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Frame = +3
Query: 225 VLSKT-LLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGS 401
++ KT +L +Y +L I+A Y+WID G LR K RTLN + LP WNFDGS
Sbjct: 7 IVEKTHILQKYLELD-QRGAIIAEYVWIDSEGG-LRSKGRTLNKKVTSVDSLPEWNFDGS 64
Query: 402 STNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCK 581
ST QA GH+SD YL P A Y DPFRRG++I+V+ + + + P + N+R + ++ K
Sbjct: 65 STGQAPGHDSDIYLKPVAFYPDPFRRGDNIVVLAECWNNDGTPNKFNHRHEAAKLFEAHK 124
Query: 582 DDEPWF 599
D E WF
Sbjct: 125 DAEMWF 130
>UniRef50_O96463 Cluster: Glutamine synthetase; n=1; Skeletonema
costatum|Rep: Glutamine synthetase - Skeletonema
costatum (Marine centric diatom)
Length = 410
Score = 107 bits (258), Expect = 1e-22
Identities = 58/129 (44%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +3
Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFI-PKAPKDLPIWNFDGSS 404
L +++ R++ LP P DK+LA Y+W+D GE R K RTL +A LP WNFDGSS
Sbjct: 45 LDTSVVDRFSALPYPDDKVLAEYVWVDAKGE-CRSKTRTLPVARTEAVDKLPNWNFDGSS 103
Query: 405 TNQADGHNSDTYLVPRAIYKDPFRRGNH----ILVMCDTYKYNMEPTESNNRISCQEAYD 572
T+QA G +S+ L P I+KDPFR H LVMCDTY E +N R +A++
Sbjct: 104 TDQAPGDDSEVILRPCRIFKDPFRPRAHGLDNNLVMCDTYTPAGEAIPTNTRAIAAKAFE 163
Query: 573 KCKDDEPWF 599
+D+E WF
Sbjct: 164 GKEDEEVWF 172
>UniRef50_Q5UR44 Cluster: Putative glutamine synthetase; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Putative glutamine
synthetase - Mimivirus
Length = 353
Score = 105 bits (251), Expect = 1e-21
Identities = 50/106 (47%), Positives = 74/106 (69%), Gaps = 4/106 (3%)
Frame = +3
Query: 294 YIWIDGSGEHLRCKDRTL-NFIPKAPK--DLPIWNFDGSSTNQADGHNSDTYLVPRAIYK 464
Y+WI G+GE LR K R L + I K D+P+WN+DGSSTNQA+G +S+ +L PR IY+
Sbjct: 23 YVWIGGNGE-LRSKTRVLYSSIMTGYKLSDIPVWNYDGSSTNQANGSSSEVFLYPRNIYR 81
Query: 465 DPFRRG-NHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWF 599
PFRR N ++V+CDTY N P E+N+R + ++K ++++PW+
Sbjct: 82 CPFRRNVNGVIVICDTYDVNGVPLETNHRHNANIIFEKYQNEKPWY 127
>UniRef50_A0DB13 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=11; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 398
Score = 98.3 bits (234), Expect = 1e-19
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +3
Query: 282 ILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIY 461
+LA YIWIDG+GE LR K + K +DL W +DGSST+QA S+ YL P +
Sbjct: 25 VLAEYIWIDGTGEQLRSKTKVYQTQIKRLEDLEWWTYDGSSTDQAVTRFSEIYLKPVRVV 84
Query: 462 KDPFRRGNHILVMCDTYKYNME-PTESNNRISCQEAYDKCKDDEPWF 599
KDPFR HILV+C+TY + + P N R + +K +D +PWF
Sbjct: 85 KDPFRGDPHILVLCETYLPDKKTPARYNFRWIANQIMEKARDHKPWF 131
>UniRef50_UPI0000F20B38 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 277
Score = 83.4 bits (197), Expect = 4e-15
Identities = 47/129 (36%), Positives = 70/129 (54%)
Frame = +3
Query: 213 SPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNF 392
S ++ L+K L RY +LP D L TY+WID G L K RT++ PK D+P W+
Sbjct: 5 SESSHLNKFLRHRYLNLP-QGDFCLVTYVWIDSCGVDLYSKTRTMDCEPKILADVPEWDV 63
Query: 393 DGSSTNQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYD 572
G T ++ +S+ L +++DPF + L++C+ K+ EP E N+R C +
Sbjct: 64 -GLETEES---SSEMLLNHVRMFRDPFFLDPNKLILCEVLKHTREPAEWNHRNRCNTLME 119
Query: 573 KCKDDEPWF 599
K KD PWF
Sbjct: 120 KVKDLHPWF 128
>UniRef50_Q4QJ42 Cluster: Glutamine synthetase, putative; n=12;
Eukaryota|Rep: Glutamine synthetase, putative -
Leishmania major
Length = 536
Score = 83.4 bits (197), Expect = 4e-15
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Frame = +3
Query: 192 SGPVLTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEH--LRCKDRTLNF---- 353
S P N+ A + +S N + TYIW+ G H +R KDRT+
Sbjct: 141 SSPTTDNTATAATNSITMSSSNK-----QTVRVTYIWLSGKDSHHDIRSKDRTMYLSQEN 195
Query: 354 IPKAPKDL------PIWNFDGSSTNQADGHNSDTYLVPRAIYKDPFRRGNH----ILVMC 503
+ K PKDL P+WNFDGSST QA G +++ L P + R + ILV+
Sbjct: 196 VAKHPKDLLANGVFPVWNFDGSSTGQAKGVDTEILLKPVNAFPCCLPRTSSKIPWILVLA 255
Query: 504 DTYKYNMEPTESNNRISCQEAYDKCKDDEPWF 599
+ Y + EPT N+R + +E +++C ++ PWF
Sbjct: 256 ECYLPSGEPTRDNSRATARETFEQCPEEHPWF 287
>UniRef50_Q7M314 Cluster: Glutamate-ammonia ligase; n=1; Bos
taurus|Rep: Glutamate-ammonia ligase - Bos taurus
(Bovine)
Length = 149
Score = 78.6 bits (185), Expect = 1e-13
Identities = 46/110 (41%), Positives = 59/110 (53%)
Frame = +3
Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
L K + Y LP DK+ A YIWIDG+GE LRCK RTL PK P +ST
Sbjct: 1 LBKGIKZVYMALP-QGDKVQAMYIWIDGTGEGLRCKTRTLXSXPKKP----------AST 49
Query: 408 NQADGHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISC 557
N + YLVP A+++DPF + LV C+ + YN P E+N +C
Sbjct: 50 ------NLZRYLVPAAMFRDPFXXDPNXLVFCEVFXYNKRPAETNLXXTC 93
>UniRef50_A0PCY1 Cluster: Glutamine synthetase precursor; n=1;
Guillardia theta|Rep: Glutamine synthetase precursor -
Guillardia theta (Cryptomonas phi)
Length = 160
Score = 77.4 bits (182), Expect = 2e-13
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +3
Query: 279 KILATYIWIDGSG---EHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVP 449
K A YIWI G G + R K R L+ P + +LP+WN+DGSST QA G +S+ YL P
Sbjct: 68 KCRAEYIWIGGRGGCGDDYRSKTRVLDKRPTSVSELPLWNYDGSSTGQAPGGDSEIYLQP 127
Query: 450 RAIYKDPFRRGNHILVMCDTY--KYNMEPT 533
+ DP R G++ILV+C+ K N PT
Sbjct: 128 AFMCADPMRGGDNILVLCEMIDPKNNPFPT 157
>UniRef50_Q42689 Cluster: Glutamine synthetase, chloroplast
precursor; n=17; cellular organisms|Rep: Glutamine
synthetase, chloroplast precursor - Chlamydomonas
reinhardtii
Length = 380
Score = 69.7 bits (163), Expect = 5e-11
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Frame = +3
Query: 288 ATYIWIDGSG---------EHLRCKDRTLNF-IPKAPKDLPIWNFDGSSTNQADGHNSDT 437
A YIW DG+ +R K + + + P W+FDGSST QA+G+NSD
Sbjct: 37 AEYIWADGNEGKPEKGMIFNEMRSKTKCFEAPLGLDASEYPDWSFDGSSTGQAEGNNSDC 96
Query: 438 YLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAY-DKCKDDEPWF 599
L P + DP R H+LVMC+ + + +P +N R +E DK ++ W+
Sbjct: 97 ILRPVRVVTDPIRGAPHVLVMCEVFAPDGKPHSTNTRAKLREIIDDKVTAEDCWY 151
>UniRef50_P20805 Cluster: Glutamine synthetase 2; n=19; Frankia|Rep:
Glutamine synthetase 2 - Frankia alni
Length = 352
Score = 69.3 bits (162), Expect = 6e-11
Identities = 41/104 (39%), Positives = 54/104 (51%)
Frame = +3
Query: 288 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYKD 467
A YIWIDG+ + +T I K K+ IW FDGSSTNQA G NSD L P D
Sbjct: 5 AEYIWIDGTEPEPLMRSKTR--IIKDGKEPEIWGFDGSSTNQAPGSNSDCVLRPVFETPD 62
Query: 468 PFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWF 599
P R G++ LV+C+ + P +N R + ++ D P F
Sbjct: 63 PIRGGDNRLVLCEVQLTDFTP-PTNTRAAALGVAERYADMSPMF 105
>UniRef50_Q6N241 Cluster: Glutamine synthetase II; n=16;
Bacteria|Rep: Glutamine synthetase II - Rhodopseudomonas
palustris
Length = 345
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +3
Query: 294 YIWIDG--SGEHLRCKDRTLNF-IPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYK 464
YIW+DG +LR K F I + LP+W FDGSST QA+GH+SD L P A+Y
Sbjct: 8 YIWLDGYKPTPNLRGKTTIKEFEIYPTLEQLPLWGFDGSSTMQAEGHSSDCVLKPVAMYP 67
Query: 465 DPFRRGNHILVMCDTYKYN-MEPTESNNR 548
D R+ N ILV+C+ + + P +N R
Sbjct: 68 DAARK-NGILVLCEVMMPDGVTPHPTNTR 95
>UniRef50_P04772 Cluster: Glutamine synthetase 2; n=211;
Bacteria|Rep: Glutamine synthetase 2 - Bradyrhizobium
japonicum
Length = 344
Score = 64.9 bits (151), Expect = 1e-09
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +3
Query: 294 YIWIDG--SGEHLRCKDRTLNFIP-KAPKDLPIWNFDGSSTNQADGHNSDTYLVPRAIYK 464
YIW+DG +LR K + F + LP+W FDGSST QA+GH+SD L P A++
Sbjct: 8 YIWLDGYTPTPNLRGKTQIKEFASFPTLEQLPLWGFDGSSTQQAEGHSSDCVLKPVAVFP 67
Query: 465 DPFRRGNHILVMCDTYKYNMEPTESNNR 548
D R N +LVMC+ + + ++N+
Sbjct: 68 DA-ARTNGVLVMCEVMMPDGKTPHASNK 94
>UniRef50_UPI000065D6C6 Cluster: Rho guanine nucleotide exchange
factor 10.; n=1; Takifugu rubripes|Rep: Rho guanine
nucleotide exchange factor 10. - Takifugu rubripes
Length = 987
Score = 37.1 bits (82), Expect = 0.32
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = -1
Query: 286 RILSAGSGRSLYRLSSVLDSTAF--GELVKTGPDRIFGLSSILVCAVSAI-LKQVRHDYV 116
++LS GS R L R ++++ GE++KT R+F L+ +L+CA I L D V
Sbjct: 327 KLLSNGS-RYLIRSDDMIETVYSDRGEIIKTKERRLFLLNDVLMCATPNIRLPLSASDLV 385
Query: 115 LKCSL 101
LKC+L
Sbjct: 386 LKCAL 390
>UniRef50_Q9BIT1 Cluster: Fibroin 2; n=1; Plectreurys tristis|Rep:
Fibroin 2 - Plectreurys tristis (Spider)
Length = 764
Score = 34.3 bits (75), Expect = 2.2
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = -1
Query: 277 SAGSGRSLYRLSSVLDSTAFGELVKTGPDRIFGLSSILVCAVSAILKQVRHDYVLKCSLD 98
SAGSG SLY LS++L TA + K+ P+ + +L+ +++ I+ + + S
Sbjct: 698 SAGSGLSLYTLSNLLSQTALA-ISKSRPE--LSPNEVLIQSLAEIIVALVQALTKQASSS 754
Query: 97 ASVEY 83
ASV+Y
Sbjct: 755 ASVQY 759
>UniRef50_Q5A3J6 Cluster: Potential CCR4-NOT complex associated
factor Caf120p; n=1; Candida albicans|Rep: Potential
CCR4-NOT complex associated factor Caf120p - Candida
albicans (Yeast)
Length = 1021
Score = 33.5 bits (73), Expect = 3.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 177 NPKILSGPVLTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHL 326
N +LS + N+ +V + +Y+DL P+D I ++GS EHL
Sbjct: 491 NDNLLSADKMKNNHKSVQLAEIYQKYSDLKTPSDNYTDRNILLNGSHEHL 540
>UniRef50_UPI0000E48261 Cluster: PREDICTED: similar to AGL019Wp;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to AGL019Wp - Strongylocentrotus purpuratus
Length = 967
Score = 32.7 bits (71), Expect = 6.8
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 348 SRCDLCTSGVRQSRRSKCRWRESCQPAV--EDHCIDSVAFWTALRSGSWLKPAPIESSDY 175
SRC C S VR + R C+W+ S + V E H S W + + +W ++ +
Sbjct: 32 SRCQRCGSSVRVAVRQSCQWQCSTRRRVCPEGHTTSS---WCSRETINWSHIGDLKQASA 88
Query: 174 LLF 166
+LF
Sbjct: 89 ILF 91
>UniRef50_A6LWB4 Cluster: SEC-C motif domain protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: SEC-C motif
domain protein - Clostridium beijerinckii NCIMB 8052
Length = 603
Score = 32.7 bits (71), Expect = 6.8
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 339 RTLNFIPKAPKDLPIWNFDGSSTNQADGHN 428
R N + K K++P+W + G++ N+ +G+N
Sbjct: 537 RVFNIVNKFIKNIPLWKYKGANINEKEGNN 566
>UniRef50_Q4YGB8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 355
Score = 32.7 bits (71), Expect = 6.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 330 CKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSD---TYLVPRAIYKDPF 473
C D +N KD WN+D S+N +D +N D T+ + Y +PF
Sbjct: 182 CNDNEIN--NNLEKDTEKWNYDNISSNNSDDNNDDIVYTHKIKDKGYNNPF 230
>UniRef50_O41930 Cluster: DNA polymerase; n=128;
Gammaherpesvirinae|Rep: DNA polymerase - Murid
herpesvirus 4 (MuHV-4) (Murine gammaherpesvirus 68)
Length = 1027
Score = 32.3 bits (70), Expect = 9.0
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 207 TNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLR 329
TN P+ + K L+SR +LP D+I Y++IDGS + L+
Sbjct: 907 TNLPHLAVFKKLVSRQEELPQIHDRI--PYVFIDGSEKGLK 945
>UniRef50_Q0UJ67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 171
Score = 32.3 bits (70), Expect = 9.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 180 PKILSGPVLTNSPNAV--LSKTLLSRYNDLPLPADKI 284
PK + GP++TNS AV LS TL S++ LP+ +
Sbjct: 100 PKAVGGPIITNSITAVSPLSSTLQSKFPKTSLPSPSV 136
>UniRef50_Q6UWJ8 Cluster: CD164 sialomucin-like 2 protein precursor;
n=18; Eutheria|Rep: CD164 sialomucin-like 2 protein
precursor - Homo sapiens (Human)
Length = 174
Score = 32.3 bits (70), Expect = 9.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 342 CDLCTSGVRQSRRSKCRWRESCQPAVEDHCI 250
C+ C G R S C W E C+P HC+
Sbjct: 60 CEHCVEGDRARNLSSCMW-EQCRPEEPGHCV 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,182,060
Number of Sequences: 1657284
Number of extensions: 13753262
Number of successful extensions: 36601
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 35364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36587
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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