Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g17f
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   6.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.9  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 418 SAWLVELPSKFHIGRSL 368
           SA LVEL  +FH G+ L
Sbjct: 97  SAQLVELEREFHHGKYL 113


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 405 TNQADGHNSDTYLVPRA 455
           T QAD  + DT L PRA
Sbjct: 523 TEQADSASVDTRLWPRA 539


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 103 LDASVEYCAKTYLRKVLSERKMFRSPH 23
           LD   ++C     R+ L+ R+ F  PH
Sbjct: 580 LDQQNQWCKPCRPREQLTWRRNFHGPH 606


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 103 LDASVEYCAKTYLRKVLSERKMFRSPH 23
           LD   ++C     R+ L+ R+ F  PH
Sbjct: 472 LDQQNQWCKPCRPREQLTWRRNFHGPH 498


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 418 SAWLVELPSKFHIGRSL 368
           SA LVEL  +FH G+ L
Sbjct: 88  SAQLVELEREFHHGKYL 104


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 267 VEDHCIDSVAFWTALRSGSWL 205
           ++   + S A+W    +GSWL
Sbjct: 179 IKSDSVTSNAWWDVHSTGSWL 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,738
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)