Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g17f
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50671| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_50203| Best HMM Match : DUF371 (HMM E-Value=5.8) 31 0.54
SB_16495| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 29 2.9
SB_33734| Best HMM Match : ELMO_CED12 (HMM E-Value=4.4e-33) 29 2.9
SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_4830| Best HMM Match : Rad10 (HMM E-Value=9.7) 29 2.9
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 28 6.6
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_6850| Best HMM Match : TPR_2 (HMM E-Value=1.7e-08) 28 6.6
SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_22915| Best HMM Match : DEAD_2 (HMM E-Value=1.9e-39) 27 8.8
>SB_50671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 145 bits (351), Expect = 3e-35
Identities = 66/122 (54%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Frame = +3
Query: 240 LLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQAD 419
+L +Y L D++ A YIW+DGSGE +RCK RTL+ PK+ +DLPIWNFDGSST QA+
Sbjct: 14 VLEKYQRLD-QGDRVQALYIWVDGSGEGIRCKSRTLDKPPKSHEDLPIWNFDGSSTAQAE 72
Query: 420 GHNSDTYLVPRAIYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAY--DKCKDDEP 593
G NSD YL P I+KDPFR GN+ILV+C+TY+++ +PT +N R +C + +K K P
Sbjct: 73 GCNSDVYLHPINIFKDPFRGGNNILVLCETYQFDHKPTRTNKRKTCFDVMESEKVKPHRP 132
Query: 594 WF 599
WF
Sbjct: 133 WF 134
>SB_50203| Best HMM Match : DUF371 (HMM E-Value=5.8)
Length = 349
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 486 HILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWF 599
HILV+ + + P ++N +S Q ++C D EPWF
Sbjct: 148 HILVISNAANL-LTPEKANIMLSSQTYKEECTDTEPWF 184
>SB_16495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 1 ESISRPPREAIETFYAPTKPFVNTFSRNIQHSHRGNISRHNRALPVSKW 147
E S PP A E F +P V T + I HS + + R P KW
Sbjct: 655 EERSIPPMRAFEQFLVRKRPAVGTANYQIHHSAEDMLQKRRRLCP--KW 701
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1870 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1910
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1880 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1920
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1890 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1930
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1900 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1940
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1910 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1950
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1920 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1960
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1930 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1970
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1940 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1980
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1950 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1990
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1960 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2000
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1970 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2010
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1980 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2020
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1990 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2030
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2000 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2040
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2010 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2050
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2020 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2060
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2030 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2070
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2040 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2080
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2050 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2090
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2060 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2100
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2070 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2110
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 2080 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2120
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1850 CCTHEYGWNNCCTHEYGWNICCTHEY-GWNNCCTHEYGWNNC 1890
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 522 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 397
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1860 CCTHEYGWNICCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1900
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 234 WTALRSGSWLKPAPIESSDYLLFWYALYQPF 142
W GSWL+ P+ +LLF Y Q F
Sbjct: 1880 WEDTEEGSWLREYPVTLIQFLLFLYNNVQQF 1910
>SB_33734| Best HMM Match : ELMO_CED12 (HMM E-Value=4.4e-33)
Length = 535
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 388 TSMAAQPTKLMGTILIPTS---YLVLFTRIHSVEEITSSLCVIRINTTWSQQRAT 543
T M + K+ G TS Y + FT ++ EE +C+ +N TW + RAT
Sbjct: 244 TKMLCEILKITGEPPSETSDEYYPIFFTTDNAFEEFFC-ICIQLVNRTWREMRAT 297
>SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2011
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +1
Query: 388 TSMAAQPTKLMGTILIPTSYLVLFTRIH-SVEEITSSLCVI-RINTTWSQQRATIASVVK 561
TS QPT+ GT PTS + H +V T S+ I R T+ T +
Sbjct: 243 TSSTPQPTRATGTPTRPTSDSLFDPNYHVTVPLATKSIFQIKRWALTFKDSETTTGRRAR 302
Query: 562 KLTTNARMMSPG 597
L N + PG
Sbjct: 303 NLVVNENKLQPG 314
>SB_4830| Best HMM Match : Rad10 (HMM E-Value=9.7)
Length = 231
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 67 NTFSRNIQHSHRGNISRHNRAL 132
NT + IQHS+ G + HN AL
Sbjct: 110 NTITDRIQHSNMGEVDNHNHAL 131
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 22 REAIETFYAPTKPFVNTFSRNIQHSHRG 105
R+A+E KP++N F+R+ Q S+ G
Sbjct: 2154 RDAVENGQVDLKPYLNCFTRHNQKSYHG 2181
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +1
Query: 367 PKICLYGTSMAAQPTKLMGTILIPTSYLVLFTRIHSVEEITSSLCVIRINTTWSQQRATI 546
P++ +Y + TK G + I T Y+ F +HS+ L + I WS
Sbjct: 751 PQVEIYEDNGLPGETKHEGAVAIAT-YIQYFKSLHSIPASLFVLLLFVIAQCWSLYTGLT 809
Query: 547 ASVVKKLTTNARMMS 591
VV + T A +S
Sbjct: 810 PGVVGLILTYATKLS 824
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 391 SMAAQPTKLMG-TILIPTSYLVLFTRIHSVEEITSSLCVIRINTTWSQQRATIASVVKKL 567
S+ A T L T + +Y LF R H+ ++T+ +C+ R S+ + +V K
Sbjct: 238 SLLANYTNLFAPTHSLLANYTNLFARTHTQHKLTTPICLHRHTMLGSRGKGIPFEIVTKK 297
Query: 568 TTNARMMSPGL 600
R P L
Sbjct: 298 KCYIRKQLPNL 308
>SB_6850| Best HMM Match : TPR_2 (HMM E-Value=1.7e-08)
Length = 523
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 237 TLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLP 380
TL + +L P+ +L TY ++ +HLR ++ L++I KA P
Sbjct: 20 TLTGKVGELESPS-ALLWTYFFLSQHYDHLRDTEKALDYINKAIDHTP 66
>SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +3
Query: 462 KDPFR-RGNHILVMCDTYKYN 521
+DPFR R ++I++MC T+ YN
Sbjct: 361 RDPFRGRFDYIVLMCPTFVYN 381
>SB_22915| Best HMM Match : DEAD_2 (HMM E-Value=1.9e-39)
Length = 418
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 480 GNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDD 587
GN + CD K+NME T N+ S + + + C DD
Sbjct: 113 GNKEQMDCDPPKWNMELTR-NDSSSSETSKEACSDD 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,043,510
Number of Sequences: 59808
Number of extensions: 438357
Number of successful extensions: 1406
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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