Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g16f
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.81 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.81 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.81 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    24   1.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   1.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   5.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   5.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 114 ETFFPFQLVMVLSAPRILQLFFSTHYLLLSSFVFALN 4
           + FF   L +   A  IL + F+  YLLL  ++F ++
Sbjct: 71  QNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIH 107


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 114 ETFFPFQLVMVLSAPRILQLFFSTHYLLLSSFVFALN 4
           + FF   L +   A  IL + F+  YLLL  ++F ++
Sbjct: 71  QNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIH 107


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 114 ETFFPFQLVMVLSAPRILQLFFSTHYLLLSSFVFALN 4
           + FF   L +   A  IL + F+  YLLL  ++F ++
Sbjct: 71  QNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIH 107


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = +3

Query: 15  IQNLKVISNELRKRVAVFLEQTEPLRAEMERKFHAINKLYEIIEYLRSFEKVDDLSRQMK 194
           IQ+  V    + KRV   L    P   ++   F  +++LY ++EY+       DL  Q++
Sbjct: 23  IQDDDVECTMVEKRVLA-LSTKPPFLVQLHSCFQTMDRLYFVMEYVNG----GDLMYQIQ 77

Query: 195 QSSDDEQLVLLY 230
           Q    ++ V ++
Sbjct: 78  QCGKFKEPVAVF 89


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 348 HQSVVSVYLLAHYANSECIPLHSFLCDPSGIIGTY 244
           HQ+ V V LL H+   + I +HS   D   ++G +
Sbjct: 153 HQTDVWVELLKHFNYMKVIFIHSSDTDGRALLGRF 187


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 457 IKNKYLMRFVNLIITSLGGGECSAPLIKGHFS 362
           ++ +YL    N  +TSL   +C   L+   FS
Sbjct: 71  VRERYLHTATNYFVTSLAFADCLVGLVVMPFS 102


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -2

Query: 49 LNSLLITFKFCICI 8
          + ++++ F FCIC+
Sbjct: 1  MKTIVVIFAFCICV 14


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -2

Query: 49 LNSLLITFKFCICI 8
          + ++++ F FCIC+
Sbjct: 1  MKTIVVIFAFCICV 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,178
Number of Sequences: 438
Number of extensions: 3193
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)