Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g15r
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   2.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.4  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.4  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    22   6.0  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    22   6.0  
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    22   6.0  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    22   6.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.0  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = -2

Query: 123 FKFYSYKIPLFNFRFLKYN---TIILWSK 46
           F F + K+  F  RF+KY+   T+ LWS+
Sbjct: 72  FNFATKKLEQFIVRFMKYHFFGTLKLWSQ 100


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 114 YSYKIPLFNFRFLKY 70
           YSY IPL+ F F+ Y
Sbjct: 2   YSYLIPLYLFLFVHY 16


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 368 VLVVYLSGRVRFVTIRNLSYLHMSNVWQ*FRNIMSNVAS 484
           +LVV LSG   F     LSY++ ++    F+ I++ VA+
Sbjct: 365 ILVVSLSGTFGFFGTHILSYINKAS----FKKIVNTVAT 399


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 619 LIEPINQYSMPKYFLSDYG 563
           LIE  + Y  PK  LSD+G
Sbjct: 247 LIEDFSGYIKPKCVLSDHG 265


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 373 KYVLEHLAKSGYDEWVGLEYK 311
           K V++HL K+  D W  LE K
Sbjct: 86  KTVIQHLYKNKQDWWKQLEAK 106


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 11  KTITLEVEPSDTIENV 26


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 11  KTITLEVEPSDTIENV 26



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 87  KTITLEVEPSDTIENV 102



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 163 KTITLEVEPSDTIENV 178



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 239 KTITLEVEPSDTIENV 254



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 315 KTITLEVEPSDTIENV 330



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 391 KTITLEVEPSDTIENV 406



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 467 KTITLEVEPSDTIENV 482



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 543 KTITLEVEPSDTIENV 558



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 619 KTITLEVEPSDTIENV 634


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 11  KTITLEVEPSDTIENV 26


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 254 KTVTIIVDPSQTILRV 301
           KT+T+ V+PS TI  V
Sbjct: 59  KTITLEVEPSDTIENV 74


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 632 EYPRTNRTNQPVFYAQIFL 576
           EY RT   N+P  +A++ L
Sbjct: 348 EYTRTTHPNEPGRFAKLLL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,319
Number of Sequences: 336
Number of extensions: 3786
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)