Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g15f
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.93 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 214 CKPALCFAFLTCSKLKPKGKPDSTALN 134
           C P L    L C K  PK +P  T L+
Sbjct: 719 CSPDLYAVMLNCWKECPKNRPTFTELS 745


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 181 CSKLKPKGKPDSTALNPASLAKAYRSKMEE 92
           C+ L  K +PD    +P    K YR++ +E
Sbjct: 206 CNHLMTKYEPDLDMNHPGFADKEYRARRKE 235


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 465 LIEPINQYSMPKYFLSDYG 521
           LIE  + Y  PK  LSD+G
Sbjct: 247 LIEDFSGYIKPKCVLSDHG 265


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 452 EYPRTNRTNQPVFYAQIFL 508
           EY RT   N+P  +A++ L
Sbjct: 348 EYTRTTHPNEPGRFAKLLL 366


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 422 QIFLKRLPMFRSWIFHFTSHYVNFFRVQ 339
           QI+ + L  +      FT+H +N  R Q
Sbjct: 156 QIYHQELEKYEQACNEFTTHVMNLLREQ 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,562
Number of Sequences: 336
Number of extensions: 3090
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)