Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g14r
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 2e-50
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 184 7e-47
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 4e-32
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 3e-24
SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 101 6e-22
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09) 91 7e-19
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 91 1e-18
SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14) 90 2e-18
SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09) 87 1e-17
SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39) 74 1e-13
SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05) 72 6e-13
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_59112| Best HMM Match : Peptidase_C1 (HMM E-Value=1.3) 58 6e-09
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8) 30 1.7
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_29044| Best HMM Match : NIDO (HMM E-Value=7.9e-28) 28 7.0
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 28 9.2
SB_46075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 196 bits (478), Expect = 2e-50
Identities = 86/135 (63%), Positives = 105/135 (77%)
Frame = -1
Query: 745 DTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTS 566
DTE++YPY D C YN GA+D GFVDIP GDE L +A+A+VGP+S+AIDAS ++
Sbjct: 198 DTEKSYPYLAKDGVCHYNKSAIGAKDTGFVDIPTGDENALQQALASVGPISIAIDASQST 257
Query: 565 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNK 386
F Y GVY++ +CSST LDHGVL VGYGTD+ G DYWLVKNSWG SWGE GYIK+ RN
Sbjct: 258 FHFYHQGVYDDPDCSSTRLDHGVLAVGYGTDD-GKDYWLVKNSWGPSWGEEGYIKIARND 316
Query: 385 NNRCGIASSASYPLV 341
+++CG+AS ASYPLV
Sbjct: 317 HDKCGVASKASYPLV 331
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 184 bits (448), Expect = 7e-47
Identities = 87/134 (64%), Positives = 99/134 (73%)
Frame = -1
Query: 745 DTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTS 566
DTE +YPY G C ++ + GA G+ DIP+G EQ L AVATVGPVSVA+DAS
Sbjct: 126 DTESSYPYLGQQGSCHFSSSHVGARVTGYQDIPQGSEQALQSAVATVGPVSVAVDASQ-- 183
Query: 565 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNK 386
+Q YSSGVY+ CSST LDHGVLV+GYG + G DYWLVKNSWG SWG GYI M RNK
Sbjct: 184 WQFYSSGVYDNPYCSSTQLDHGVLVIGYG-NYNGQDYWLVKNSWGYSWGVEGYIMMSRNK 242
Query: 385 NNRCGIASSASYPL 344
NN+CGIASSASYPL
Sbjct: 243 NNQCGIASSASYPL 256
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 135 bits (326), Expect = 4e-32
Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Frame = -1
Query: 742 TEQTY-PYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTS 566
TE++Y PY G D C GA G+V+I EGD L A+A GP+SV+IDASH S
Sbjct: 724 TEESYGPYLGADGYCHKKDAEIGATITGYVNITEGDLSALKTAIAQKGPISVSIDASHKS 783
Query: 565 FQLYSSGVYNEEEC--SSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIR 392
YS GVY E +C + DLDH VL VGYGT + G YW++KNSW WG GY+ ++
Sbjct: 784 LSFYSYGVYYEPKCGNKNEDLDHSVLAVGYGTMD-GKPYWMIKNSWSTHWGMNGYV-LMS 841
Query: 391 NKNNRCGIASSASYPLV 341
K+N CG+A++A+Y L+
Sbjct: 842 QKDNNCGVATAATYVLM 858
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 109 bits (261), Expect = 3e-24
Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = -1
Query: 742 TEQTYP-YEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTS 566
TE++Y Y + C + + GA ++ I +G+ +L AVA GPVS+ ++ +
Sbjct: 583 TEESYGRYLAQEGYCHFKNTSIGARLDKYMSIRKGNTTQLKLAVAFYGPVSILVNTQPKT 642
Query: 565 FQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNK 386
F+ Y SG+Y + +C+ LDH L VGYG +E+GV YW+VKNSW WGE GYIK I K
Sbjct: 643 FKFYGSGIYYDTQCTHA-LDHAALAVGYG-EEKGVPYWIVKNSWSAMWGEEGYIK-IAMK 699
Query: 385 NNRCGIASSA 356
++ CG+A A
Sbjct: 700 DDNCGVAQKA 709
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -1
Query: 508 DHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
DH VL++GYG+D GV YWL+KN W WG G+IK+ K CGI
Sbjct: 1425 DHAVLLIGYGSDN-GVPYWLIKNFWSHKWGNNGFIKI---KQGLCGI 1467
>SB_46438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 103 bits (247), Expect = 2e-22
Identities = 46/62 (74%), Positives = 50/62 (80%)
Frame = -1
Query: 526 CSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGIASSASYP 347
CSST LDH +LVVGYG + G DYWLVKNSWG WG GYI M RNK+N+CGIASSASYP
Sbjct: 3 CSSTQLDHAILVVGYGNNN-GQDYWLVKNSWGTGWGMSGYILMSRNKDNQCGIASSASYP 61
Query: 346 LV 341
LV
Sbjct: 62 LV 63
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 101 bits (242), Expect = 6e-22
Identities = 44/98 (44%), Positives = 68/98 (69%)
Frame = -1
Query: 652 IPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTD 473
+P+ ++ L +A GP S+AI+ + S + YS GVY++ +C + +HGV+VVGYG +
Sbjct: 127 VPKYNQTALRRGLALYGPASIAINVNRKSLKFYSGGVYDDPQCPP-NTNHGVVVVGYGVE 185
Query: 472 EQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGIASS 359
E G YW+VKNSWG+ WGE G+I++ R K N+CG+ S+
Sbjct: 186 E-GQPYWIVKNSWGKFWGEQGFIRISR-KKNQCGVVSN 221
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 100 bits (240), Expect = 1e-21
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -1
Query: 745 DTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTS 566
DTE++YPYE +D+CR+ N GA D GFVD+ GDE+ L A TVGP+SVAIDA H S
Sbjct: 416 DTEESYPYEARNDRCRFQKSNIGAVDTGFVDVTHGDEEALKTAAGTVGPISVAIDAGHMS 475
Query: 565 FQLYSSGVYN 536
FQ Y SGVYN
Sbjct: 476 FQFYHSGVYN 485
>SB_28132| Best HMM Match : Peptidase_C1 (HMM E-Value=4.8e-09)
Length = 160
Score = 91.5 bits (217), Expect = 7e-19
Identities = 38/99 (38%), Positives = 62/99 (62%)
Frame = -1
Query: 664 GFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVG 485
GF+ + + + L A+AT GP++ +++A +F+ YS G+Y++ +C +H VL +G
Sbjct: 19 GFMRVKKHNPTLLKFALATHGPIASSLNADQKTFRFYSHGIYDDPKCGRKT-NHAVLTIG 77
Query: 484 YGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
YG+ YWL+KNSWG WGE GYI+ I + + CG+
Sbjct: 78 YGSQHSNASYWLIKNSWGHLWGENGYIR-ISSDRDTCGV 115
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/119 (36%), Positives = 69/119 (57%)
Frame = -1
Query: 724 YEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSG 545
Y G + C+ + GA + + + L +A++ GP +++I+A+ S + YS G
Sbjct: 239 YRGQEGFCKTSNLTVGARITSYRRVKRFNPIALKKALSYHGPATISINANPKSLKFYSDG 298
Query: 544 VYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
+ +++ CS+ DH VL++GYG+D GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 299 IMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWLIKNSWSHKWGNNGFIKI---KQGLCGI 352
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/119 (36%), Positives = 69/119 (57%)
Frame = -1
Query: 724 YEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSG 545
Y G + C+ + GA + + + L +A++ GP +++I+A+ S + YS G
Sbjct: 361 YRGQEGFCKTSNLTVGARITSYRRVKRFNPIALKKALSYHGPATISINANPKSLKFYSDG 420
Query: 544 VYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
+ +++ CS+ DH VL++GYG+D GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 421 IMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWLIKNSWSHKWGNNGFIKI---KQGLCGI 474
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 90.6 bits (215), Expect = 1e-18
Identities = 43/119 (36%), Positives = 69/119 (57%)
Frame = -1
Query: 724 YEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSG 545
Y G + C+ + GA + + + L +A++ GP +++I+A+ S + YS G
Sbjct: 96 YRGQEGFCKTSNLTVGARITSYRRVKRFNPIALKKALSYHGPATISINANPKSLKFYSDG 155
Query: 544 VYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
+ +++ CS+ DH VL++GYG+D GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 156 IMSDKHCSNKT-DHAVLLIGYGSDN-GVPYWLIKNSWSHKWGNNGFIKI---KQGLCGI 209
>SB_48770| Best HMM Match : Peptidase_C1 (HMM E-Value=1.9e-14)
Length = 183
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/119 (36%), Positives = 69/119 (57%)
Frame = -1
Query: 724 YEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSG 545
Y G + C+ + GA + + + L +A++ GP +++I+A+ S + YS G
Sbjct: 25 YRGQEGFCKTSNLTVGARITSYRRVKRFNPIALKKALSYHGPATISINANPKSLKYYSDG 84
Query: 544 VYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
+ +++ CS+ DH VL++GYG+ E GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 85 IMSDKHCSNKT-DHAVLLIGYGS-ENGVPYWLIKNSWSNKWGNNGFIKI---KQGLCGI 138
>SB_34416| Best HMM Match : Peptidase_C1 (HMM E-Value=2e-09)
Length = 817
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/112 (36%), Positives = 66/112 (58%)
Frame = -1
Query: 703 CRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEEC 524
C+ + GA + + + L +A++ GP +++I+A+ S + YS G+ +++ C
Sbjct: 4 CKTSNLTVGARITSYRRVKRFNPIALKKALSYHGPATISINANPKSLKFYSDGIMSDKHC 63
Query: 523 SSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
S+ DH VL++GYG+D GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 64 SNKT-DHAVLLIGYGSDN-GVPYWLIKNSWSHKWGNNGFIKI---KQGLCGI 110
>SB_18818| Best HMM Match : Peptidase_C1 (HMM E-Value=1.1e-39)
Length = 504
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = -1
Query: 745 DTEQTYPYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTS 566
++E YPY+G D KC++N V I + DE+++ +A GP+S+ I+A+ +
Sbjct: 301 ESESDYPYKGADSKCKFNKAEVKVTINSSVVISK-DEKEIAAWLAKNGPISIGINAN--A 357
Query: 565 FQLYSSGVYNEEE--CSSTDLDHGVLVVGYGTDEQGVDYWLVKN 440
Q Y G+ + + C+ + L+HGVL+VGYG + G YW++KN
Sbjct: 358 MQFYMGGIAHPWKIFCNPSSLNHGVLIVGYGV-KNGTPYWIIKN 400
>SB_58003| Best HMM Match : Peptidase_C1 (HMM E-Value=7.6e-05)
Length = 110
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/79 (39%), Positives = 54/79 (68%)
Frame = -1
Query: 631 KLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYW 452
++M + GP++ I+A+ + + Y+ GVY E + + ++H V VVG+G D+ GV+YW
Sbjct: 8 RMMAEIFARGPIACGIEAT-SRLEQYTGGVYTEYD-PNPQINHIVSVVGWGVDD-GVEYW 64
Query: 451 LVKNSWGRSWGELGYIKMI 395
+V+NSWG WGE G++K++
Sbjct: 65 VVRNSWGTPWGENGFLKIV 83
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/70 (48%), Positives = 40/70 (57%)
Frame = -1
Query: 550 SGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCG 371
S +Y + SS H VLVVGYG E G YWLVKNSW +WG GYIK I K N CG
Sbjct: 386 SWIYLHDSSSSV---HSVLVVGYGV-EDGEPYWLVKNSWSTTWGMDGYIK-IAWKRNTCG 440
Query: 370 IASSASYPLV 341
+ + L+
Sbjct: 441 VTRNPVVALI 450
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = -1
Query: 508 DHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
DH VL++GYG+D GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 172 DHAVLLIGYGSDN-GVPYWLIKNSWSHKWGNNGFIKI---KQGLCGI 214
>SB_59112| Best HMM Match : Peptidase_C1 (HMM E-Value=1.3)
Length = 82
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -1
Query: 505 HGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 368
H VL++GYG+D GV YWL+KNSW WG G+IK+ K CGI
Sbjct: 24 HAVLLIGYGSDN-GVPYWLIKNSWSHKWGNNGFIKI---KQGLCGI 65
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 745 DTEQTYPYEGVDDKCRYNPKNTGA 674
DTEQ+YPY D +C + P + GA
Sbjct: 459 DTEQSYPYTARDGQCHFKPGSVGA 482
>SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)
Length = 232
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2
Query: 732 PTPTRELTTSAGTIPRTPVLRTWASWTS 649
PT TR TTS +P T VL +W +WT+
Sbjct: 147 PTSTRT-TTSHVVMPTTQVLPSWTNWTT 173
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -2
Query: 738 SRPTPTRELTTSAGTIPR 685
SRP+P+R++T S+ TIPR
Sbjct: 1402 SRPSPSRDMTRSSETIPR 1419
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 582 SMATETGPTVATASISFCSSPSGMSTKPTSSAPV 683
S + T P+V +S+S S+PS K TSS+P+
Sbjct: 2152 SPRSTTAPSVVNSSLSPSSTPSSTPLKGTSSSPL 2185
>SB_29044| Best HMM Match : NIDO (HMM E-Value=7.9e-28)
Length = 258
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 424 WGELGYIKMIRNKNNRCGIASSASYPLV*TPP 329
W E+G+ + N N GI A P TPP
Sbjct: 199 WPEIGFRCLFNNSNQGVGIFKGAESPYCTTPP 230
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 391 NKNNRCGIASSASYPLV*TPPSLPRSCNIHIS 296
N+ RC S SYP++ PS+PR I I+
Sbjct: 521 NRRRRCSAKSGVSYPVI-AKPSVPRLPEIVIT 551
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Frame = -1
Query: 445 KNSWGRSWGELGY-----IKMIRNKNNRCGIASSASYPLV*TP---PSLPRSCNIHISYV 290
+ SW R W GY + M+++ CGI S TP PSLP + H S V
Sbjct: 796 RTSWCRKWASYGYCHTKAVYMLKSCKRSCGICEDPSGSKA-TPVGDPSLPCE-DKHKSCV 853
Query: 289 YLWLS 275
Y W S
Sbjct: 854 Y-WAS 857
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 573 CEASMATETGPTVATASISFCSS 641
C + M+T++G T +A ISFC S
Sbjct: 734 CPSKMSTKSGATNKSACISFCDS 756
>SB_46075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Frame = -1
Query: 706 KCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATV----GPVSVAIDASHTSFQLYSSGVY 539
KCR N + E P + L++A V G SVA D + ++ G
Sbjct: 19 KCRLNDADKFTEVNTLSFSPAEASKHLIKAKLFVSSYQGDTSVAADETKYLVRVIGEGAI 78
Query: 538 NEEECSSTDLDHGVLVVGYGTDE 470
E C +D G +VVG T +
Sbjct: 79 GELVCLDASVDLGDIVVGSSTSK 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,787,399
Number of Sequences: 59808
Number of extensions: 324754
Number of successful extensions: 1137
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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