Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g13r
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p pro...    38   0.004
AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-P...    38   0.004
AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-P...    38   0.005
Y11128-1|CAA72010.1|  403|Drosophila melanogaster C901 protein p...    31   0.83 
AE014298-1533|AAF47984.1|  559|Drosophila melanogaster CG1567-PA...    31   0.83 
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         27   7.7  

>AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p
           protein.
          Length = 98

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 268 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCYV*RNS 125
           ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY  R++
Sbjct: 47  NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCYELRSN 91


>AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-PB,
           isoform B protein.
          Length = 98

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -2

Query: 268 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCYV*RNS 125
           ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY  R++
Sbjct: 47  NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCYELRSN 91


>AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-PA,
           isoform A protein.
          Length = 127

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 268 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCY 140
           ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY
Sbjct: 47  NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCY 86


>Y11128-1|CAA72010.1|  403|Drosophila melanogaster C901 protein
           protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 289 LLTQTPFSEEDCIRQGGICVRTEEC 215
           LL QTP  + DC +Q G C +  EC
Sbjct: 207 LLCQTPICDPDCSKQHGYCRKPGEC 231


>AE014298-1533|AAF47984.1|  559|Drosophila melanogaster CG1567-PA
           protein.
          Length = 559

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 289 LLTQTPFSEEDCIRQGGICVRTEEC 215
           LL QTP  + DC +Q G C +  EC
Sbjct: 205 LLCQTPICDPDCSKQHGYCRKPGEC 229


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -3

Query: 198 RRFRNFYVQTKRTLE*PAAMSEETRCL 118
           R FRNFY+  KR  E P   SE   CL
Sbjct: 686 RLFRNFYINAKRPNE-PTVRSEIQLCL 711


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,657,152
Number of Sequences: 53049
Number of extensions: 377073
Number of successful extensions: 665
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)