Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g13f
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p pro...    38   0.005
AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-P...    38   0.005
AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-P...    38   0.007
Y11128-1|CAA72010.1|  403|Drosophila melanogaster C901 protein p...    31   1.1  
AE014298-1533|AAF47984.1|  559|Drosophila melanogaster CG1567-PA...    31   1.1  
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         27   9.9  

>AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p
           protein.
          Length = 98

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 152 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCYV*RNS 295
           ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY  R++
Sbjct: 47  NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCYELRSN 91


>AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-PB,
           isoform B protein.
          Length = 98

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 152 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCYV*RNS 295
           ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY  R++
Sbjct: 47  NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCYELRSN 91


>AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-PA,
           isoform A protein.
          Length = 127

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 152 SEEDCIRQGGICVRTEEC-DPDNISTISQFLCPNQAHLGVACCY 280
           ++  C+  GG+CV   +C +P    T ++ LCP  A  GV CCY
Sbjct: 47  NDRQCVMVGGLCVAESDCIEP----TSNKGLCPTSAGEGVECCY 86


>Y11128-1|CAA72010.1|  403|Drosophila melanogaster C901 protein
           protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 131 LLTQTPFSEEDCIRQGGICVRTEEC 205
           LL QTP  + DC +Q G C +  EC
Sbjct: 207 LLCQTPICDPDCSKQHGYCRKPGEC 231


>AE014298-1533|AAF47984.1|  559|Drosophila melanogaster CG1567-PA
           protein.
          Length = 559

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 131 LLTQTPFSEEDCIRQGGICVRTEEC 205
           LL QTP  + DC +Q G C +  EC
Sbjct: 205 LLCQTPICDPDCSKQHGYCRKPGEC 229


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 222 RRFRNFYVQTKRTLE*PAAMSEETRCL 302
           R FRNFY+  KR  E P   SE   CL
Sbjct: 686 RLFRNFYINAKRPNE-PTVRSEIQLCL 711


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,071,947
Number of Sequences: 53049
Number of extensions: 384836
Number of successful extensions: 691
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)