Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g12f
         (446 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    47   2e-04
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   0.30 
UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;...    33   3.7  
UniRef50_Q7S239 Cluster: Putative uncharacterized protein NCU098...    32   4.9  
UniRef50_Q8ZSR1 Cluster: Cytochrome C-type biogenesis protein, p...    31   8.6  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -3

Query: 432 LRWVDELTAHLVLSGYWSP 376
           LRWVDELTAHLVLSGYWSP
Sbjct: 157 LRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.3 bits (80), Expect = 0.30
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 253 AGWWYLPVRTPKRSYHQ 203
           A WWYLP RT KRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q8T107 Cluster: Putative uncharacterized protein Bmhig;
           n=1; Bombyx mori|Rep: Putative uncharacterized protein
           Bmhig - Bombyx mori (Silk moth)
          Length = 786

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 21/36 (58%), Positives = 22/36 (61%)
 Frame = -3

Query: 132 NREHLLSTYFIRKIGTRLRDSNTGASLHTNAPDVLS 25
           NR  LLSTYFIR           GASL+TNAPD LS
Sbjct: 386 NRGRLLSTYFIRN----------GASLNTNAPDDLS 411


>UniRef50_Q7S239 Cluster: Putative uncharacterized protein
           NCU09875.1; n=2; Sordariales|Rep: Putative
           uncharacterized protein NCU09875.1 - Neurospora crassa
          Length = 520

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 22/56 (39%), Positives = 29/56 (51%)
 Frame = +1

Query: 85  GTNFSNEIRTQQMFTVDFHGEGITSCNKNQTRKIIICVITGGRTSWESARVGTTTP 252
           G + +  I T     VDFH E +TSC +N  RKIII  +T G   +E   +G   P
Sbjct: 91  GRDVTVVIPTVDPLGVDFH-ECLTSCARNGPRKIII--VTAGEDLYEKT-LGAVAP 142


>UniRef50_Q8ZSR1 Cluster: Cytochrome C-type biogenesis protein,
           probable; n=1; Pyrobaculum aerophilum|Rep: Cytochrome
           C-type biogenesis protein, probable - Pyrobaculum
           aerophilum
          Length = 702

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +2

Query: 296 WGSRCHYTETLELISQGGWRIYVVDVYGLQ*PLNTRWAVSSSTHL 430
           WG   +Y     L++ GG  +Y+  + GL   +   W +++++H+
Sbjct: 46  WGMPLYYRLAASLVNVGGIMLYIAAILGLMAVVAKSWRLAAASHV 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,496,442
Number of Sequences: 1657284
Number of extensions: 9895302
Number of successful extensions: 20228
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20226
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)